Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH12P55289 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.58■□□□□ 0.41
CDH12P55289 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.58■□□□□ 0.41
CDH12P55289 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH12P55289 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH12P55289 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH12P55289 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH12P55289 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH12P55289 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.58■□□□□ 0.4
CDH12P55289 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.4
CDH12P55289 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDH12P55289 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDH12P55289 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
CDH12P55289 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDH12P55289 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH12P55289 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH12P55289 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CDH12P55289 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH12P55289 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CDH12P55289 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDH12P55289 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH12P55289 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH12P55289 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH12P55289 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 ID1-201ENST00000376105 1233 ntBASIC17.57■□□□□ 0.4
CDH12P55289 RNA5SP413-201ENST00000516373 109 ntBASIC17.57■□□□□ 0.4
CDH12P55289 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH12P55289 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH12P55289 PRKY-204ENST00000533551 1019 ntBASIC17.57■□□□□ 0.4
CDH12P55289 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH12P55289 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH12P55289 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDH12P55289 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CDH12P55289 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH12P55289 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 NOC2LP1-202ENST00000452600 2235 ntBASIC17.56■□□□□ 0.4
CDH12P55289 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH12P55289 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH12P55289 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH12P55289 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH12P55289 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH12P55289 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH12P55289 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDH12P55289 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms