Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EFNA3P52797 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.67■□□□□ 0.42
EFNA3P52797 AL161938.1-201ENST00000569833 2180 ntBASIC17.67■□□□□ 0.42
EFNA3P52797 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
EFNA3P52797 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
EFNA3P52797 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
EFNA3P52797 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.67■□□□□ 0.42
EFNA3P52797 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EFNA3P52797 AC036111.1-201ENST00000533973 1582 ntBASIC17.66■□□□□ 0.42
EFNA3P52797 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EFNA3P52797 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNA3P52797 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EFNA3P52797 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EFNA3P52797 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 COX11P1-201ENST00000489116 835 ntBASIC17.66■□□□□ 0.42
EFNA3P52797 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.66■□□□□ 0.42
EFNA3P52797 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.66■□□□□ 0.42
EFNA3P52797 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNA3P52797 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.66■□□□□ 0.42
EFNA3P52797 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EFNA3P52797 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
EFNA3P52797 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.66■□□□□ 0.42
EFNA3P52797 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNA3P52797 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNA3P52797 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
EFNA3P52797 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.65■□□□□ 0.42
EFNA3P52797 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.65■□□□□ 0.42
EFNA3P52797 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.65■□□□□ 0.42
EFNA3P52797 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EFNA3P52797 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.65■□□□□ 0.42
EFNA3P52797 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.65■□□□□ 0.42
EFNA3P52797 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 AC022616.7-201ENST00000525383 220 ntBASIC17.65■□□□□ 0.42
EFNA3P52797 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
EFNA3P52797 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
EFNA3P52797 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EFNA3P52797 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNA3P52797 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
EFNA3P52797 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
EFNA3P52797 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
EFNA3P52797 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EFNA3P52797 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EFNA3P52797 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.64■□□□□ 0.41
EFNA3P52797 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.64■□□□□ 0.41
EFNA3P52797 KRT18P38-201ENST00000449496 1282 ntBASIC17.64■□□□□ 0.41
EFNA3P52797 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.64■□□□□ 0.41
EFNA3P52797 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.64■□□□□ 0.41
EFNA3P52797 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.64■□□□□ 0.41
EFNA3P52797 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
EFNA3P52797 MYC-208ENST00000641036 567 ntBASIC17.64■□□□□ 0.41
EFNA3P52797 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
EFNA3P52797 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNA3P52797 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.64■□□□□ 0.41
EFNA3P52797 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.63■□□□□ 0.41
EFNA3P52797 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms