Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC9A3P48764 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC9A3P48764 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC9A3P48764 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 C1QL1P1-201ENST00000568105 661 ntBASIC17.29■□□□□ 0.36
SLC9A3P48764 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.29■□□□□ 0.36
SLC9A3P48764 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC9A3P48764 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SLC9A3P48764 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC9A3P48764 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC9A3P48764 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC9A3P48764 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC9A3P48764 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
SLC9A3P48764 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC9A3P48764 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 BCL2-203ENST00000589955 5011 ntBASIC17.28■□□□□ 0.36
SLC9A3P48764 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SLC9A3P48764 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC9A3P48764 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC9A3P48764 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 AL160286.2-201ENST00000567150 934 ntBASIC17.28■□□□□ 0.36
SLC9A3P48764 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC9A3P48764 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC9A3P48764 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SLC9A3P48764 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC9A3P48764 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC9A3P48764 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC9A3P48764 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC9A3P48764 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC9A3P48764 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC9A3P48764 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC9A3P48764 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC9A3P48764 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 KRT17P3-201ENST00000420566 1262 ntBASIC17.27■□□□□ 0.36
SLC9A3P48764 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC9A3P48764 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC9A3P48764 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC9A3P48764 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC9A3P48764 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SLC9A3P48764 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC9A3P48764 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC9A3P48764 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC9A3P48764 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC9A3P48764 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC9A3P48764 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC9A3P48764 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC9A3P48764 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC9A3P48764 WIZP1-201ENST00000531444 2299 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC9A3P48764 NOC2LP2-201ENST00000407594 1944 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms