Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 TSPY7P-201ENST00000431358 1114 ntBASIC16.8■□□□□ 0.28
CSNK1A1P48729 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 AP003071.4-201ENST00000562276 1284 ntBASIC16.8■□□□□ 0.28
CSNK1A1P48729 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1A1P48729 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1A1P48729 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1A1P48729 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1A1P48729 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 MFAP1P1-201ENST00000442257 1255 ntBASIC16.78■□□□□ 0.28
CSNK1A1P48729 SNORA78-201ENST00000459373 127 ntBASIC16.78■□□□□ 0.28
CSNK1A1P48729 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 AC097488.1-201ENST00000507834 756 ntBASIC16.78■□□□□ 0.28
CSNK1A1P48729 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.78■□□□□ 0.28
CSNK1A1P48729 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1A1P48729 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CSNK1A1P48729 AC096733.2-201ENST00000609937 1394 ntBASIC16.77■□□□□ 0.28
CSNK1A1P48729 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.77■□□□□ 0.28
CSNK1A1P48729 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSNK1A1P48729 AC083906.6-201ENST00000641366 219 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms