Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZNF444P1-201ENST00000559497 298 ntBASIC20.08■□□□□ 0.81
BRCC3P46736 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
BRCC3P46736 FP475955.4-201ENST00000623131 1990 ntBASIC20.08■□□□□ 0.8
BRCC3P46736 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.08■□□□□ 0.8
BRCC3P46736 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
BRCC3P46736 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BRCC3P46736 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BRCC3P46736 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
BRCC3P46736 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.07■□□□□ 0.8
BRCC3P46736 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.07■□□□□ 0.8
BRCC3P46736 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.07■□□□□ 0.8
BRCC3P46736 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.07■□□□□ 0.8
BRCC3P46736 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 RASA4DP-201ENST00000460726 1199 ntBASIC20.07■□□□□ 0.8
BRCC3P46736 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 AC092597.1-201ENST00000487352 616 ntBASIC20.07■□□□□ 0.8
BRCC3P46736 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.07■□□□□ 0.8
BRCC3P46736 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.07■□□□□ 0.8
BRCC3P46736 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.07■□□□□ 0.8
BRCC3P46736 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.07■□□□□ 0.8
BRCC3P46736 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.07■□□□□ 0.8
BRCC3P46736 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
BRCC3P46736 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRCC3P46736 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.07■□□□□ 0.8
BRCC3P46736 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.07■□□□□ 0.8
BRCC3P46736 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 AIRN-201ENST00000601203 4374 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.06■□□□□ 0.8
BRCC3P46736 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
BRCC3P46736 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.06■□□□□ 0.8
BRCC3P46736 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.06■□□□□ 0.8
BRCC3P46736 SPDYE13P-201ENST00000445314 798 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.06■□□□□ 0.8
BRCC3P46736 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.06■□□□□ 0.8
BRCC3P46736 SEC1P-202ENST00000473944 940 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BRCC3P46736 VENTXP5-201ENST00000523979 775 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 AL136038.3-201ENST00000561909 1096 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.06■□□□□ 0.8
BRCC3P46736 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.06■□□□□ 0.8
BRCC3P46736 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 AC116407.4-201ENST00000623319 1061 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BRCC3P46736 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 AL109659.2-201ENST00000606809 1674 ntBASIC20.06■□□□□ 0.8
BRCC3P46736 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.06■□□□□ 0.8
BRCC3P46736 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCC3P46736 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BRCC3P46736 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BRCC3P46736 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BRCC3P46736 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.05■□□□□ 0.8
BRCC3P46736 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 KRT8P32-201ENST00000512863 1461 ntBASIC20.05■□□□□ 0.8
BRCC3P46736 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCC3P46736 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BRCC3P46736 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 HBZP1-201ENST00000354915 429 ntBASIC20.04■□□□□ 0.8
BRCC3P46736 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
BRCC3P46736 AC112497.1-201ENST00000624824 639 ntBASIC20.04■□□□□ 0.8
BRCC3P46736 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCC3P46736 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.04■□□□□ 0.8
BRCC3P46736 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms