Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN9P43378 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
PTPN9P43378 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN9P43378 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN9P43378 AL353719.1-201ENST00000566847 864 ntBASIC19.6■□□□□ 0.73
PTPN9P43378 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN9P43378 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN9P43378 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN9P43378 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN9P43378 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PTPN9P43378 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN9P43378 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN9P43378 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 MMP23A-201ENST00000234610 1017 ntBASIC19.59■□□□□ 0.73
PTPN9P43378 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.59■□□□□ 0.73
PTPN9P43378 CCR12P-201ENST00000446203 998 ntBASIC19.59■□□□□ 0.73
PTPN9P43378 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN9P43378 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN9P43378 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN9P43378 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN9P43378 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN9P43378 KRT8P9-201ENST00000558927 1449 ntBASIC19.59■□□□□ 0.73
PTPN9P43378 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN9P43378 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN9P43378 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN9P43378 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PTPN9P43378 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN9P43378 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN9P43378 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN9P43378 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN9P43378 EGLN1P1-201ENST00000531623 762 ntBASIC19.58■□□□□ 0.72
PTPN9P43378 MIR4674-201ENST00000582457 87 ntBASIC19.58■□□□□ 0.72
PTPN9P43378 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
PTPN9P43378 AC116562.4-202ENST00000641738 218 ntBASIC19.58■□□□□ 0.72
PTPN9P43378 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PTPN9P43378 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN9P43378 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN9P43378 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN9P43378 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 CYP2D8P-201ENST00000433633 1490 ntBASIC19.57■□□□□ 0.72
PTPN9P43378 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTPN9P43378 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 MCCD1P1-208ENST00000445732 328 ntBASIC19.57■□□□□ 0.72
PTPN9P43378 AP003041.3-201ENST00000527151 707 ntBASIC19.57■□□□□ 0.72
PTPN9P43378 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPN9P43378 AC010947.1-201ENST00000623454 693 ntBASIC19.57■□□□□ 0.72
PTPN9P43378 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.57■□□□□ 0.72
PTPN9P43378 AL357033.4-201ENST00000617703 1807 ntBASIC19.57■□□□□ 0.72
PTPN9P43378 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTPN9P43378 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN9P43378 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN9P43378 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 AC008556.1-201ENST00000610908 2040 ntBASIC19.56■□□□□ 0.72
PTPN9P43378 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
PTPN9P43378 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 AC007663.1-201ENST00000438948 1240 ntBASIC19.56■□□□□ 0.72
PTPN9P43378 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 BX088651.1-201ENST00000540551 451 ntBASIC19.56■□□□□ 0.72
PTPN9P43378 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PTPN9P43378 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PTPN9P43378 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTPN9P43378 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN9P43378 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN9P43378 AL020996.1-203ENST00000536896 2307 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms