Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.23■■□□□ 1.31
PDE6BP35913 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDE6BP35913 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.23■■□□□ 1.31
PDE6BP35913 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.23■■□□□ 1.31
PDE6BP35913 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PDE6BP35913 GUSBP12-201ENST00000513727 720 ntBASIC23.23■■□□□ 1.31
PDE6BP35913 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.23■■□□□ 1.31
PDE6BP35913 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDE6BP35913 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDE6BP35913 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.23■■□□□ 1.31
PDE6BP35913 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.23■■□□□ 1.31
PDE6BP35913 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDE6BP35913 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE6BP35913 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 AC099778.1-201ENST00000568593 1911 ntBASIC23.22■■□□□ 1.31
PDE6BP35913 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
PDE6BP35913 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
PDE6BP35913 TSPY12P-201ENST00000421279 868 ntBASIC23.22■■□□□ 1.31
PDE6BP35913 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.22■■□□□ 1.31
PDE6BP35913 AC064862.7-201ENST00000604520 867 ntBASIC23.22■■□□□ 1.31
PDE6BP35913 REXO1L6P-202ENST00000619970 1078 ntBASIC23.22■■□□□ 1.31
PDE6BP35913 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE6BP35913 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PDE6BP35913 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PDE6BP35913 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PDE6BP35913 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE6BP35913 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE6BP35913 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE6BP35913 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PDE6BP35913 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE6BP35913 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PDE6BP35913 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 IGHGP-201ENST00000390555 1178 ntBASIC23.21■■□□□ 1.31
PDE6BP35913 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
PDE6BP35913 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE6BP35913 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.21■■□□□ 1.31
PDE6BP35913 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
PDE6BP35913 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.21■■□□□ 1.31
PDE6BP35913 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 MIR3180-4-201ENST00000582223 153 ntBASIC23.21■■□□□ 1.31
PDE6BP35913 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.21■■□□□ 1.31
PDE6BP35913 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PDE6BP35913 AL592071.1-201ENST00000611956 408 ntBASIC23.21■■□□□ 1.31
PDE6BP35913 AC124864.1-201ENST00000623408 392 ntBASIC23.21■■□□□ 1.31
PDE6BP35913 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.21■■□□□ 1.31
PDE6BP35913 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE6BP35913 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.2■■□□□ 1.3
PDE6BP35913 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PDE6BP35913 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 MIR564-202ENST00000385049 94 ntBASIC23.2■■□□□ 1.3
PDE6BP35913 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 PMS2P1-201ENST00000431037 1228 ntBASIC23.2■■□□□ 1.3
PDE6BP35913 VENTXP7-201ENST00000475503 772 ntBASIC23.2■■□□□ 1.3
PDE6BP35913 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PDE6BP35913 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDE6BP35913 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.2■■□□□ 1.3
PDE6BP35913 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE6BP35913 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE6BP35913 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.19■■□□□ 1.3
PDE6BP35913 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PDE6BP35913 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 RN7SL606P-201ENST00000472779 293 ntBASIC23.19■■□□□ 1.3
PDE6BP35913 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.19■■□□□ 1.3
PDE6BP35913 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.19■■□□□ 1.3
PDE6BP35913 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.19■■□□□ 1.3
PDE6BP35913 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms