Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
CHMP24386 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP24386 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CHMP24386 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP24386 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 FP475955.4-201ENST00000623131 1990 ntBASIC17.63■□□□□ 0.41
CHMP24386 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP24386 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHMP24386 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP24386 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 CD177P1-201ENST00000606252 935 ntBASIC17.63■□□□□ 0.41
CHMP24386 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP24386 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP24386 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP24386 KRT8P8-201ENST00000434750 1448 ntBASIC17.63■□□□□ 0.41
CHMP24386 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.62■□□□□ 0.41
CHMP24386 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP24386 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP24386 Z98044.1-201ENST00000632503 1764 ntBASIC17.62■□□□□ 0.41
CHMP24386 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP24386 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CHMP24386 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP24386 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP24386 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP24386 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHMP24386 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP24386 AC005332.8-201ENST00000622750 2735 ntBASIC17.61■□□□□ 0.41
CHMP24386 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP24386 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP24386 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 TSPY7P-201ENST00000431358 1114 ntBASIC17.61■□□□□ 0.41
CHMP24386 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP24386 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP24386 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP24386 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.61■□□□□ 0.41
CHMP24386 AL445675.2-201ENST00000620291 557 ntBASIC17.61■□□□□ 0.41
CHMP24386 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP24386 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP24386 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHMP24386 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP24386 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP24386 FAM197Y1-201ENST00000421178 764 ntBASIC17.6■□□□□ 0.41
CHMP24386 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms