Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL9A1P20849 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.69
COL9A1P20849 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.38■□□□□ 0.69
COL9A1P20849 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.38■□□□□ 0.69
COL9A1P20849 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL9A1P20849 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.38■□□□□ 0.69
COL9A1P20849 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 AC092474.2-201ENST00000424288 719 ntBASIC19.38■□□□□ 0.69
COL9A1P20849 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.38■□□□□ 0.69
COL9A1P20849 AL645939.2-201ENST00000427340 991 ntBASIC19.38■□□□□ 0.69
COL9A1P20849 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
COL9A1P20849 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.38■□□□□ 0.69
COL9A1P20849 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.38■□□□□ 0.69
COL9A1P20849 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.38■□□□□ 0.69
COL9A1P20849 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.38■□□□□ 0.69
COL9A1P20849 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
COL9A1P20849 MIR7706-201ENST00000613747 67 ntBASIC19.38■□□□□ 0.69
COL9A1P20849 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.38■□□□□ 0.69
COL9A1P20849 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL9A1P20849 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 AC063926.2-201ENST00000623766 1308 ntBASIC19.37■□□□□ 0.69
COL9A1P20849 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.37■□□□□ 0.69
COL9A1P20849 AC120057.1-201ENST00000483947 663 ntBASIC19.37■□□□□ 0.69
COL9A1P20849 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.37■□□□□ 0.69
COL9A1P20849 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.37■□□□□ 0.69
COL9A1P20849 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.37■□□□□ 0.69
COL9A1P20849 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.37■□□□□ 0.69
COL9A1P20849 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL9A1P20849 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.37■□□□□ 0.69
COL9A1P20849 GABARAPL3-202ENST00000624044 1851 ntBASIC19.37■□□□□ 0.69
COL9A1P20849 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
COL9A1P20849 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL9A1P20849 AC022494.1-201ENST00000466044 728 ntBASIC19.36■□□□□ 0.69
COL9A1P20849 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.36■□□□□ 0.69
COL9A1P20849 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL9A1P20849 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL9A1P20849 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.36■□□□□ 0.69
COL9A1P20849 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
COL9A1P20849 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL9A1P20849 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL9A1P20849 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL9A1P20849 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.35■□□□□ 0.69
COL9A1P20849 AC211486.1-202ENST00000416371 468 ntBASIC19.35■□□□□ 0.69
COL9A1P20849 SEC1P-202ENST00000473944 940 ntBASIC19.35■□□□□ 0.69
COL9A1P20849 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.35■□□□□ 0.69
COL9A1P20849 AC211476.1-201ENST00000503899 468 ntBASIC19.35■□□□□ 0.69
COL9A1P20849 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms