Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 RBM17P1-201ENST00000453646 1190 ntBASIC19.05■□□□□ 0.64
HLA-DPA1P20036 MIR4497-201ENST00000583208 89 ntBASIC19.05■□□□□ 0.64
HLA-DPA1P20036 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DPA1P20036 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DPA1P20036 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 CRYGFP-201ENST00000418459 633 ntBASIC19.03■□□□□ 0.64
HLA-DPA1P20036 CA15P1-201ENST00000481698 905 ntBASIC19.03■□□□□ 0.64
HLA-DPA1P20036 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 AC093503.3-201ENST00000624917 2352 ntBASIC19.03■□□□□ 0.64
HLA-DPA1P20036 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DPA1P20036 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 AL596275.1-201ENST00000423464 877 ntBASIC19.02■□□□□ 0.64
HLA-DPA1P20036 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 AL512353.2-201ENST00000448759 1962 ntBASIC19.02■□□□□ 0.64
HLA-DPA1P20036 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DPA1P20036 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DPA1P20036 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPA1P20036 KRT8P32-201ENST00000512863 1461 ntBASIC19.02■□□□□ 0.63
HLA-DPA1P20036 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPA1P20036 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DPA1P20036 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DPA1P20036 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms