Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DOBP13765 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DOBP13765 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOBP13765 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOBP13765 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOBP13765 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DOBP13765 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOBP13765 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DOBP13765 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DOBP13765 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DOBP13765 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DOBP13765 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HLA-DOBP13765 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOBP13765 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOBP13765 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOBP13765 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOBP13765 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.89■□□□□ 0.3
HLA-DOBP13765 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.3
HLA-DOBP13765 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DOBP13765 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.89■□□□□ 0.29
HLA-DOBP13765 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MIR718-201ENST00000390190 70 ntBASIC16.89■□□□□ 0.29
HLA-DOBP13765 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 AC083906.6-201ENST00000641366 219 ntBASIC16.89■□□□□ 0.29
HLA-DOBP13765 AP006294.2-201ENST00000641667 209 ntBASIC16.89■□□□□ 0.29
HLA-DOBP13765 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DOBP13765 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DOBP13765 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 AP003071.4-201ENST00000562276 1284 ntBASIC16.88■□□□□ 0.29
HLA-DOBP13765 SLC25A1P4-201ENST00000567977 778 ntBASIC16.88■□□□□ 0.29
HLA-DOBP13765 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 AL138781.2-201ENST00000617896 1843 ntBASIC16.88■□□□□ 0.29
HLA-DOBP13765 AC093525.10-201ENST00000625130 1569 ntBASIC16.88■□□□□ 0.29
HLA-DOBP13765 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DOBP13765 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DOBP13765 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms