Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
CD48P09326 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 KRT8P3-201ENST00000519669 1449 ntBASIC19.56■□□□□ 0.72
CD48P09326 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.56■□□□□ 0.72
CD48P09326 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CD48P09326 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.56■□□□□ 0.72
CD48P09326 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.56■□□□□ 0.72
CD48P09326 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
CD48P09326 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.55■□□□□ 0.72
CD48P09326 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.55■□□□□ 0.72
CD48P09326 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.55■□□□□ 0.72
CD48P09326 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.55■□□□□ 0.72
CD48P09326 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CD48P09326 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
CD48P09326 AL499627.1-201ENST00000569373 2188 ntBASIC19.55■□□□□ 0.72
CD48P09326 REXO1L10P-201ENST00000615707 1290 ntBASIC19.55■□□□□ 0.72
CD48P09326 REXO1L12P-201ENST00000622156 912 ntBASIC19.55■□□□□ 0.72
CD48P09326 AC068587.9-201ENST00000641814 219 ntBASIC19.55■□□□□ 0.72
CD48P09326 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD48P09326 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
CD48P09326 KRT8P32-201ENST00000512863 1461 ntBASIC19.54■□□□□ 0.72
CD48P09326 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.54■□□□□ 0.72
CD48P09326 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
CD48P09326 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.54■□□□□ 0.72
CD48P09326 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.54■□□□□ 0.72
CD48P09326 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CD48P09326 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CD48P09326 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.54■□□□□ 0.72
CD48P09326 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.54■□□□□ 0.72
CD48P09326 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.54■□□□□ 0.72
CD48P09326 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.54■□□□□ 0.72
CD48P09326 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.54■□□□□ 0.72
CD48P09326 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.54■□□□□ 0.72
CD48P09326 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.54■□□□□ 0.72
CD48P09326 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
CD48P09326 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD48P09326 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
CD48P09326 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.53■□□□□ 0.72
CD48P09326 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.53■□□□□ 0.72
CD48P09326 AC008550.1-201ENST00000511500 884 ntBASIC19.53■□□□□ 0.72
CD48P09326 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.53■□□□□ 0.72
CD48P09326 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.53■□□□□ 0.72
CD48P09326 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CD48P09326 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CD48P09326 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD48P09326 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.53■□□□□ 0.72
CD48P09326 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.52■□□□□ 0.72
CD48P09326 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.52■□□□□ 0.72
CD48P09326 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.52■□□□□ 0.72
CD48P09326 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CD48P09326 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.52■□□□□ 0.72
CD48P09326 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CD48P09326 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.52■□□□□ 0.72
CD48P09326 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.52■□□□□ 0.72
CD48P09326 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms