Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CHCHD2P8-201ENST00000429873 447 ntBASIC19.54■□□□□ 0.72
RHOP08100 AC104390.1-201ENST00000555663 520 ntBASIC19.54■□□□□ 0.72
RHOP08100 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RHOP08100 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.54■□□□□ 0.72
RHOP08100 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.54■□□□□ 0.72
RHOP08100 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHOP08100 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
RHOP08100 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RHOP08100 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.53■□□□□ 0.72
RHOP08100 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.53■□□□□ 0.72
RHOP08100 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.53■□□□□ 0.72
RHOP08100 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.53■□□□□ 0.72
RHOP08100 RN7SL510P-201ENST00000581311 263 ntBASIC19.53■□□□□ 0.72
RHOP08100 AC010240.3-201ENST00000607688 395 ntBASIC19.53■□□□□ 0.72
RHOP08100 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.53■□□□□ 0.72
RHOP08100 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.53■□□□□ 0.72
RHOP08100 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
RHOP08100 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
RHOP08100 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RHOP08100 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHOP08100 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 HOXB1-202ENST00000577092 1414 ntBASIC19.52■□□□□ 0.72
RHOP08100 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.52■□□□□ 0.72
RHOP08100 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 RNF126P1-202ENST00000569893 925 ntBASIC19.52■□□□□ 0.72
RHOP08100 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.52■□□□□ 0.72
RHOP08100 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.52■□□□□ 0.72
RHOP08100 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHOP08100 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RHOP08100 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.52■□□□□ 0.71
RHOP08100 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.52■□□□□ 0.71
RHOP08100 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RHOP08100 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.52■□□□□ 0.71
RHOP08100 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RHOP08100 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RHOP08100 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
RHOP08100 KRT18P1-202ENST00000452408 1331 ntBASIC19.51■□□□□ 0.71
RHOP08100 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RHOP08100 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RHOP08100 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RHOP08100 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 MIR564-202ENST00000385049 94 ntBASIC19.51■□□□□ 0.71
RHOP08100 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RHOP08100 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.51■□□□□ 0.71
RHOP08100 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.51■□□□□ 0.71
RHOP08100 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RHOP08100 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.51■□□□□ 0.71
RHOP08100 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.51■□□□□ 0.71
RHOP08100 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RHOP08100 FEM1AP3-201ENST00000403722 1741 ntBASIC19.51■□□□□ 0.71
RHOP08100 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RHOP08100 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RHOP08100 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.5■□□□□ 0.71
RHOP08100 AC111152.3-201ENST00000569699 673 ntBASIC19.5■□□□□ 0.71
RHOP08100 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms