Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CTSDP07339 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CTSDP07339 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSDP07339 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CTSDP07339 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTSDP07339 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSDP07339 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CTSDP07339 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSDP07339 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSDP07339 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.66■□□□□ 0.1
CTSDP07339 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 AL137784.2-201ENST00000607332 1000 ntBASIC15.66■□□□□ 0.1
CTSDP07339 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CTSDP07339 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CTSDP07339 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSDP07339 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.65■□□□□ 0.1
CTSDP07339 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.65■□□□□ 0.1
CTSDP07339 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 AC006557.6-201ENST00000623071 864 ntBASIC15.65■□□□□ 0.1
CTSDP07339 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSDP07339 GNAS-203ENST00000306120 1878 ntBASIC15.65■□□□□ 0.1
CTSDP07339 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSDP07339 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSDP07339 OR6D1P-202ENST00000641007 5290 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms