Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.86■□□□□ 0.13
CD74P04233 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 AC124283.5-201ENST00000624661 1809 ntBASIC15.86■□□□□ 0.13
CD74P04233 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 AC099398.1-201ENST00000567919 2776 ntBASIC15.86■□□□□ 0.13
CD74P04233 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.85■□□□□ 0.13
CD74P04233 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 AC138028.4-201ENST00000564984 1845 ntBASIC15.85■□□□□ 0.13
CD74P04233 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.85■□□□□ 0.13
CD74P04233 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD74P04233 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD74P04233 LSM12P1-201ENST00000411836 588 ntBASIC15.85■□□□□ 0.13
CD74P04233 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.85■□□□□ 0.13
CD74P04233 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 AC137761.2-201ENST00000561729 223 ntBASIC15.85■□□□□ 0.13
CD74P04233 AC145350.3-201ENST00000569033 163 ntBASIC15.85■□□□□ 0.13
CD74P04233 AC005181.1-201ENST00000604782 1256 ntBASIC15.85■□□□□ 0.13
CD74P04233 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CD74P04233 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CD74P04233 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.85■□□□□ 0.13
CD74P04233 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.85■□□□□ 0.13
CD74P04233 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.85■□□□□ 0.13
CD74P04233 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.85■□□□□ 0.13
CD74P04233 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CD74P04233 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD74P04233 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CD74P04233 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD74P04233 AL499627.1-201ENST00000569373 2188 ntBASIC15.85■□□□□ 0.13
CD74P04233 AC093677.2-201ENST00000600169 1863 ntBASIC15.84■□□□□ 0.13
CD74P04233 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.84■□□□□ 0.13
CD74P04233 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 AC093787.1-201ENST00000450396 207 ntBASIC15.84■□□□□ 0.13
CD74P04233 RPS2P52-201ENST00000469610 820 ntBASIC15.84■□□□□ 0.13
CD74P04233 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.84■□□□□ 0.13
CD74P04233 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.84■□□□□ 0.13
CD74P04233 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.84■□□□□ 0.13
CD74P04233 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.84■□□□□ 0.13
CD74P04233 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD74P04233 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.84■□□□□ 0.13
CD74P04233 MTMR9LP-203ENST00000426597 1545 ntBASIC15.84■□□□□ 0.13
CD74P04233 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD74P04233 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD74P04233 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CD74P04233 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CD74P04233 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.83■□□□□ 0.13
CD74P04233 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CD74P04233 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD74P04233 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CD74P04233 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.83■□□□□ 0.12
CD74P04233 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.83■□□□□ 0.12
CD74P04233 RAP2CP1-201ENST00000605103 478 ntBASIC15.83■□□□□ 0.12
CD74P04233 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms