Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
HLA-DQA2P01906 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA2P01906 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA2P01906 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA2P01906 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DQA2P01906 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 AL160286.2-201ENST00000567150 934 ntBASIC16.95■□□□□ 0.3
HLA-DQA2P01906 AC069544.1-201ENST00000609399 999 ntBASIC16.95■□□□□ 0.3
HLA-DQA2P01906 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 NEFHP1-201ENST00000412845 2629 ntBASIC16.95■□□□□ 0.3
HLA-DQA2P01906 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA2P01906 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 AC026366.1-201ENST00000488803 879 ntBASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA2P01906 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 AC239809.2-201ENST00000415381 517 ntBASIC16.93■□□□□ 0.3
HLA-DQA2P01906 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 C1QL1P1-201ENST00000568105 661 ntBASIC16.93■□□□□ 0.3
HLA-DQA2P01906 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 AL023875.1-201ENST00000640777 796 ntBASIC16.93■□□□□ 0.3
HLA-DQA2P01906 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms