Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN1O95832 PHGDH-210ENST00000641115 1638 ntBASIC16.83■□□□□ 0.28
CLDN1O95832 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN1O95832 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN1O95832 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN1O95832 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 TMEM179-206ENST00000616017 1645 ntBASIC16.82■□□□□ 0.28
CLDN1O95832 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLDN1O95832 AP002469.2-201ENST00000531724 424 ntBASIC16.82■□□□□ 0.28
CLDN1O95832 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN1O95832 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN1O95832 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLDN1O95832 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN1O95832 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN1O95832 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 AC007952.6-201ENST00000573168 2673 ntBASIC16.81■□□□□ 0.28
CLDN1O95832 AC003957.1-201ENST00000625108 2673 ntBASIC16.81■□□□□ 0.28
CLDN1O95832 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 KRT18P13-201ENST00000400056 1290 ntBASIC16.81■□□□□ 0.28
CLDN1O95832 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 RASA4DP-201ENST00000460726 1199 ntBASIC16.81■□□□□ 0.28
CLDN1O95832 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN1O95832 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN1O95832 AC091304.2-201ENST00000564639 760 ntBASIC16.81■□□□□ 0.28
CLDN1O95832 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN1O95832 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN1O95832 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CLDN1O95832 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 KRT8P8-201ENST00000434750 1448 ntBASIC16.8■□□□□ 0.28
CLDN1O95832 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CLDN1O95832 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN1O95832 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN1O95832 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN1O95832 AC120114.3-201ENST00000611923 658 ntBASIC16.8■□□□□ 0.28
CLDN1O95832 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN1O95832 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN1O95832 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN1O95832 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN1O95832 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN1O95832 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms