Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE3O75131 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CPNE3O75131 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE3O75131 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.08■□□□□ 0.49
CPNE3O75131 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
CPNE3O75131 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE3O75131 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 FAM8A6P-201ENST00000407496 1135 ntBASIC18.08■□□□□ 0.48
CPNE3O75131 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 TSPY5P-201ENST00000426936 936 ntBASIC18.08■□□□□ 0.48
CPNE3O75131 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE3O75131 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CPNE3O75131 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE3O75131 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE3O75131 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE3O75131 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE3O75131 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
CPNE3O75131 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPNE3O75131 TSPY21P-201ENST00000433481 731 ntBASIC18.07■□□□□ 0.48
CPNE3O75131 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE3O75131 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE3O75131 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE3O75131 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CPNE3O75131 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE3O75131 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms