Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCD1O75127 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCD1O75127 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PTCD1O75127 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.2■■□□□ 1.46
PTCD1O75127 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.2■■□□□ 1.46
PTCD1O75127 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCD1O75127 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 AC004870.1-201ENST00000315132 882 ntBASIC24.19■■□□□ 1.46
PTCD1O75127 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.19■■□□□ 1.46
PTCD1O75127 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.19■■□□□ 1.46
PTCD1O75127 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD1O75127 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCD1O75127 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PTCD1O75127 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PTCD1O75127 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 TEX21P-204ENST00000641479 1693 ntBASIC24.18■■□□□ 1.46
PTCD1O75127 AL512353.2-201ENST00000448759 1962 ntBASIC24.18■■□□□ 1.46
PTCD1O75127 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PTCD1O75127 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.18■■□□□ 1.46
PTCD1O75127 KRT18P23-201ENST00000435622 1283 ntBASIC24.18■■□□□ 1.46
PTCD1O75127 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.18■■□□□ 1.46
PTCD1O75127 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.18■■□□□ 1.46
PTCD1O75127 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PTCD1O75127 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 AL732292.2-201ENST00000609649 430 ntBASIC24.18■■□□□ 1.46
PTCD1O75127 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.18■■□□□ 1.46
PTCD1O75127 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.18■■□□□ 1.46
PTCD1O75127 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PTCD1O75127 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD1O75127 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PTCD1O75127 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.17■■□□□ 1.46
PTCD1O75127 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
PTCD1O75127 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.17■■□□□ 1.46
PTCD1O75127 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.17■■□□□ 1.46
PTCD1O75127 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PTCD1O75127 AL109659.2-201ENST00000606809 1674 ntBASIC24.17■■□□□ 1.46
PTCD1O75127 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD1O75127 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.17■■□□□ 1.46
PTCD1O75127 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.17■■□□□ 1.46
PTCD1O75127 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PTCD1O75127 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.16■■□□□ 1.46
PTCD1O75127 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.16■■□□□ 1.46
PTCD1O75127 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.16■■□□□ 1.46
PTCD1O75127 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.16■■□□□ 1.46
PTCD1O75127 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.16■■□□□ 1.46
PTCD1O75127 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 NUS1P1-201ENST00000446295 882 ntBASIC24.16■■□□□ 1.46
PTCD1O75127 AP000867.3-201ENST00000524675 377 ntBASIC24.16■■□□□ 1.46
PTCD1O75127 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.16■■□□□ 1.46
PTCD1O75127 TPSP2-201ENST00000561760 610 ntBASIC24.16■■□□□ 1.46
PTCD1O75127 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
PTCD1O75127 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 TREX1-205ENST00000625293 1783 ntBASIC24.16■■□□□ 1.46
PTCD1O75127 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PTCD1O75127 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 AC125437.2-201ENST00000625180 2167 ntBASIC24.15■■□□□ 1.46
PTCD1O75127 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.15■■□□□ 1.46
PTCD1O75127 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms