Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTNSO60931 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CTNSO60931 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTNSO60931 HMGA1P5-201ENST00000412453 271 ntBASIC17.67■□□□□ 0.42
CTNSO60931 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNSO60931 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNSO60931 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 FAM87A-204ENST00000613235 858 ntBASIC17.67■□□□□ 0.42
CTNSO60931 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 GPAT2P1-201ENST00000444924 1672 ntBASIC17.67■□□□□ 0.42
CTNSO60931 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNSO60931 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNSO60931 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNSO60931 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNSO60931 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTNSO60931 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNSO60931 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 ECEL1P3-201ENST00000427961 737 ntBASIC17.66■□□□□ 0.42
CTNSO60931 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNSO60931 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNSO60931 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNSO60931 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.66■□□□□ 0.42
CTNSO60931 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNSO60931 AC083906.6-201ENST00000641366 219 ntBASIC17.66■□□□□ 0.42
CTNSO60931 AC068587.9-201ENST00000641814 219 ntBASIC17.66■□□□□ 0.42
CTNSO60931 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNSO60931 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTNSO60931 RCC2P3-201ENST00000418112 1537 ntBASIC17.66■□□□□ 0.42
CTNSO60931 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTNSO60931 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNSO60931 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTNSO60931 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 AL109659.2-201ENST00000606809 1674 ntBASIC17.65■□□□□ 0.42
CTNSO60931 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTNSO60931 MCCD1P1-208ENST00000445732 328 ntBASIC17.65■□□□□ 0.42
CTNSO60931 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.65■□□□□ 0.42
CTNSO60931 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 AL512604.3-201ENST00000569583 964 ntBASIC17.65■□□□□ 0.42
CTNSO60931 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CTNSO60931 AC005363.2-201ENST00000618631 242 ntBASIC17.65■□□□□ 0.42
CTNSO60931 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTNSO60931 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.65■□□□□ 0.42
CTNSO60931 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTNSO60931 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNSO60931 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNSO60931 AC006333.2-201ENST00000607957 2099 ntBASIC17.65■□□□□ 0.42
CTNSO60931 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTNSO60931 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.64■□□□□ 0.42
CTNSO60931 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.64■□□□□ 0.42
CTNSO60931 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CTNSO60931 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTNSO60931 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTNSO60931 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTNSO60931 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNSO60931 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 AC120498.9-201ENST00000339021 3867 ntBASIC17.64■□□□□ 0.41
CTNSO60931 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms