Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.43■□□□□ 0.7
TSPAN3O60637 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 TSPY5P-201ENST00000426936 936 ntBASIC19.43■□□□□ 0.7
TSPAN3O60637 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.43■□□□□ 0.7
TSPAN3O60637 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 AL441883.1-201ENST00000566170 1045 ntBASIC19.43■□□□□ 0.7
TSPAN3O60637 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN3O60637 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN3O60637 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TSPAN3O60637 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TSPAN3O60637 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
TSPAN3O60637 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.42■□□□□ 0.7
TSPAN3O60637 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 AC036111.1-201ENST00000533973 1582 ntBASIC19.42■□□□□ 0.7
TSPAN3O60637 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
TSPAN3O60637 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.42■□□□□ 0.7
TSPAN3O60637 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.42■□□□□ 0.7
TSPAN3O60637 AC022616.7-201ENST00000525383 220 ntBASIC19.42■□□□□ 0.7
TSPAN3O60637 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.42■□□□□ 0.7
TSPAN3O60637 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.42■□□□□ 0.7
TSPAN3O60637 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
TSPAN3O60637 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN3O60637 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.41■□□□□ 0.7
TSPAN3O60637 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.41■□□□□ 0.7
TSPAN3O60637 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TSPAN3O60637 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
TSPAN3O60637 AC063952.2-201ENST00000498792 1227 ntBASIC19.41■□□□□ 0.7
TSPAN3O60637 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.41■□□□□ 0.7
TSPAN3O60637 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.41■□□□□ 0.7
TSPAN3O60637 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.41■□□□□ 0.7
TSPAN3O60637 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.41■□□□□ 0.7
TSPAN3O60637 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TSPAN3O60637 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
TSPAN3O60637 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN3O60637 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.41■□□□□ 0.7
TSPAN3O60637 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.41■□□□□ 0.7
TSPAN3O60637 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TSPAN3O60637 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.4■□□□□ 0.7
TSPAN3O60637 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.4■□□□□ 0.7
TSPAN3O60637 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN3O60637 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms