Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AL031598.1-201ENST00000561511 1773 ntBASIC16.82■□□□□ 0.28
TRAF3IP2O43734 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 AC079598.2-202ENST00000546624 1451 ntBASIC16.81■□□□□ 0.28
TRAF3IP2O43734 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 AL512353.2-201ENST00000448759 1962 ntBASIC16.81■□□□□ 0.28
TRAF3IP2O43734 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 UNC93B2-201ENST00000285383 730 ntBASIC16.81■□□□□ 0.28
TRAF3IP2O43734 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 AL355075.4-201ENST00000554988 638 ntBASIC16.81■□□□□ 0.28
TRAF3IP2O43734 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.81■□□□□ 0.28
TRAF3IP2O43734 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP2O43734 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 KRT8P32-201ENST00000512863 1461 ntBASIC16.8■□□□□ 0.28
TRAF3IP2O43734 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 AP000525.1-201ENST00000608286 694 ntBASIC16.8■□□□□ 0.28
TRAF3IP2O43734 HEIH-201ENST00000623091 1652 ntBASIC16.8■□□□□ 0.28
TRAF3IP2O43734 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP2O43734 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 AC068587.9-201ENST00000641814 219 ntBASIC16.79■□□□□ 0.28
TRAF3IP2O43734 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF3IP2O43734 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms