Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.87■□□□□ 0.61
LDB2O43679 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.87■□□□□ 0.61
LDB2O43679 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LDB2O43679 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LDB2O43679 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 CA15P1-201ENST00000481698 905 ntBASIC18.86■□□□□ 0.61
LDB2O43679 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB2O43679 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.86■□□□□ 0.61
LDB2O43679 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LDB2O43679 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
LDB2O43679 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LDB2O43679 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB2O43679 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.85■□□□□ 0.61
LDB2O43679 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 TSPY15P-201ENST00000457163 923 ntBASIC18.85■□□□□ 0.61
LDB2O43679 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB2O43679 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB2O43679 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB2O43679 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB2O43679 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 RCC2P3-201ENST00000418112 1537 ntBASIC18.84■□□□□ 0.61
LDB2O43679 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
LDB2O43679 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB2O43679 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB2O43679 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LDB2O43679 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LDB2O43679 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB2O43679 FITM1-202ENST00000559294 800 ntBASIC18.84■□□□□ 0.61
LDB2O43679 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
LDB2O43679 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB2O43679 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB2O43679 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
LDB2O43679 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB2O43679 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
LDB2O43679 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDB2O43679 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.83■□□□□ 0.61
LDB2O43679 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LDB2O43679 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
LDB2O43679 AL390955.1-201ENST00000428694 934 ntBASIC18.83■□□□□ 0.6
LDB2O43679 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.83■□□□□ 0.6
LDB2O43679 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB2O43679 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LDB2O43679 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 WIZP1-201ENST00000531444 2299 ntBASIC18.83■□□□□ 0.6
LDB2O43679 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LDB2O43679 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB2O43679 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDB2O43679 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.82■□□□□ 0.6
LDB2O43679 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
LDB2O43679 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms