Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.3■□□□□ 0.2
PHF1O43189 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 NAPSB-206ENST00000562112 1266 ntBASIC16.3■□□□□ 0.2
PHF1O43189 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.3■□□□□ 0.2
PHF1O43189 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PHF1O43189 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.3■□□□□ 0.2
PHF1O43189 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHF1O43189 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHF1O43189 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHF1O43189 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHF1O43189 AC079598.2-202ENST00000546624 1451 ntBASIC16.29■□□□□ 0.2
PHF1O43189 HTR7P1-202ENST00000624664 4411 ntBASIC16.29■□□□□ 0.2
PHF1O43189 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PHF1O43189 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHF1O43189 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
PHF1O43189 AL121894.2-201ENST00000602977 491 ntBASIC16.29■□□□□ 0.2
PHF1O43189 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
PHF1O43189 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.29■□□□□ 0.2
PHF1O43189 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHF1O43189 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PHF1O43189 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHF1O43189 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PHF1O43189 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.28■□□□□ 0.2
PHF1O43189 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 UPK3BP1-201ENST00000428678 509 ntBASIC16.28■□□□□ 0.2
PHF1O43189 YBX1P10-201ENST00000444752 975 ntBASIC16.28■□□□□ 0.2
PHF1O43189 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.28■□□□□ 0.2
PHF1O43189 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHF1O43189 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
PHF1O43189 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PHF1O43189 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHF1O43189 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PHF1O43189 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHF1O43189 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.27■□□□□ 0.2
PHF1O43189 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHF1O43189 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHF1O43189 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms