Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF11BO00300 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 AC092368.3-202ENST00000574180 1591 ntBASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 AC091874.3-201ENST00000512672 1195 ntBASIC17.46■□□□□ 0.39
TNFRSF11BO00300 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.46■□□□□ 0.39
TNFRSF11BO00300 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 OR6D1P-202ENST00000641007 5290 ntBASIC17.46■□□□□ 0.39
TNFRSF11BO00300 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF11BO00300 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF11BO00300 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TNFRSF11BO00300 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
TNFRSF11BO00300 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.45■□□□□ 0.38
TNFRSF11BO00300 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 MIR663A-201ENST00000385250 93 ntBASIC17.45■□□□□ 0.38
TNFRSF11BO00300 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TNFRSF11BO00300 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 CDCA4P2-201ENST00000441182 718 ntBASIC17.44■□□□□ 0.38
TNFRSF11BO00300 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 AC092118.2-201ENST00000613495 667 ntBASIC17.44■□□□□ 0.38
TNFRSF11BO00300 AL121829.2-201ENST00000620908 328 ntBASIC17.44■□□□□ 0.38
TNFRSF11BO00300 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms