Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SYCE3A1L190 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SYCE3A1L190 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYCE3A1L190 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.46■■□□□ 1.03
SYCE3A1L190 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.46■■□□□ 1.03
SYCE3A1L190 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.46■■□□□ 1.03
SYCE3A1L190 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SYCE3A1L190 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.46■■□□□ 1.03
SYCE3A1L190 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SYCE3A1L190 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.46■■□□□ 1.03
SYCE3A1L190 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYCE3A1L190 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.46■■□□□ 1.03
SYCE3A1L190 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.46■■□□□ 1.03
SYCE3A1L190 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
SYCE3A1L190 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SYCE3A1L190 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.45■■□□□ 1.02
SYCE3A1L190 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.45■■□□□ 1.02
SYCE3A1L190 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.45■■□□□ 1.02
SYCE3A1L190 AC073210.2-201ENST00000430369 194 ntBASIC21.45■■□□□ 1.02
SYCE3A1L190 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.45■■□□□ 1.02
SYCE3A1L190 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.45■■□□□ 1.02
SYCE3A1L190 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.45■■□□□ 1.02
SYCE3A1L190 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 AC005829.2-201ENST00000571422 1056 ntBASIC21.45■■□□□ 1.02
SYCE3A1L190 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
SYCE3A1L190 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.45■■□□□ 1.02
SYCE3A1L190 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.45■■□□□ 1.02
SYCE3A1L190 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.45■■□□□ 1.02
SYCE3A1L190 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SYCE3A1L190 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SYCE3A1L190 GNAS-203ENST00000306120 1878 ntBASIC21.45■■□□□ 1.02
SYCE3A1L190 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.45■■□□□ 1.02
SYCE3A1L190 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYCE3A1L190 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SYCE3A1L190 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.44■■□□□ 1.02
SYCE3A1L190 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.44■■□□□ 1.02
SYCE3A1L190 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.44■■□□□ 1.02
SYCE3A1L190 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.44■■□□□ 1.02
SYCE3A1L190 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.44■■□□□ 1.02
SYCE3A1L190 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.44■■□□□ 1.02
SYCE3A1L190 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.44■■□□□ 1.02
SYCE3A1L190 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.44■■□□□ 1.02
SYCE3A1L190 PRORSD1P-202ENST00000563365 2154 ntBASIC21.44■■□□□ 1.02
SYCE3A1L190 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYCE3A1L190 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SYCE3A1L190 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.44■■□□□ 1.02
SYCE3A1L190 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SYCE3A1L190 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.43■■□□□ 1.02
SYCE3A1L190 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SYCE3A1L190 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SYCE3A1L190 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
SYCE3A1L190 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
SYCE3A1L190 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.43■■□□□ 1.02
SYCE3A1L190 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.43■■□□□ 1.02
SYCE3A1L190 AC016769.1-201ENST00000409132 1010 ntBASIC21.43■■□□□ 1.02
SYCE3A1L190 AL512625.2-201ENST00000417533 625 ntBASIC21.43■■□□□ 1.02
SYCE3A1L190 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.43■■□□□ 1.02
SYCE3A1L190 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.43■■□□□ 1.02
SYCE3A1L190 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
SYCE3A1L190 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.43■■□□□ 1.02
SYCE3A1L190 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.43■■□□□ 1.02
SYCE3A1L190 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYCE3A1L190 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms