Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 AC142381.4-202ENST00000563973 229 ntBASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.56□□□□□ -0.24
TRGV4A0A0C4DH28 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 NIFKP9-201ENST00000419265 221 ntBASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 KSR1P1-201ENST00000446298 240 ntBASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.55□□□□□ -0.24
TRGV4A0A0C4DH28 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 AL158047.1-201ENST00000445918 881 ntBASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 AL445675.2-201ENST00000620291 557 ntBASIC13.54□□□□□ -0.24
TRGV4A0A0C4DH28 AL359736.2-201ENST00000621992 437 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms