Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 HOXB1-202ENST00000577092 1414 ntBASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 KRT8P26-201ENST00000534154 1276 ntBASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 PRELID1P1-202ENST00000567272 903 ntBASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 AC079602.3-201ENST00000623931 403 ntBASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 AL391807.1-203ENST00000604392 2365 ntBASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 AC016734.2-201ENST00000624325 1377 ntBASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 MIR662-201ENST00000384847 95 ntBASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 AC008556.1-201ENST00000610908 2040 ntBASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 FEM1AP3-201ENST00000403722 1741 ntBASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV17A0A0B4J275 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AC104390.1-201ENST00000555663 520 ntBASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AC010240.3-201ENST00000607688 395 ntBASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV17A0A0B4J275 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV17A0A0B4J275 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms