Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AL121906.2-201ENST00000621597 723 ntBASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC006557.6-201ENST00000623071 864 ntBASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC135050.7-201ENST00000624508 2218 ntBASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC006333.2-201ENST00000607957 2099 ntBASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC120498.8-201ENST00000614275 531 ntBASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC079598.2-202ENST00000546624 1451 ntBASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 POM121L13P-201ENST00000422362 380 ntBASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PRKY-204ENST00000533551 1019 ntBASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms