Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 AC124016.1-201ENST00000609552 612 ntBASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 AC135050.7-201ENST00000624508 2218 ntBASIC17.11■□□□□ 0.33
TRAV27A0A087WT01 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
TRAV27A0A087WT01 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV27A0A087WT01 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms