Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.64□□□□□ -1.99
THBS1P07996 MIR7106-201ENST00000612419 65 ntBASIC2.64□□□□□ -1.99
THBS1P07996 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
THBS1P07996 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
THBS1P07996 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.63□□□□□ -1.99
THBS1P07996 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS1P07996 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS1P07996 MIR520C-201ENST00000385005 87 ntBASIC2.63□□□□□ -1.99
THBS1P07996 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
THBS1P07996 SNORD4B-201ENST00000459083 72 ntBASIC2.63□□□□□ -1.99
THBS1P07996 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
THBS1P07996 Y_RNA.660-201ENST00000516002 120 ntBASIC2.63□□□□□ -1.99
THBS1P07996 RNA5SP437-201ENST00000517249 129 ntBASIC2.63□□□□□ -1.99
THBS1P07996 MIR3162-201ENST00000581818 82 ntBASIC2.63□□□□□ -1.99
THBS1P07996 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
THBS1P07996 AC022202.1-201ENST00000613515 211 ntBASIC2.63□□□□□ -1.99
THBS1P07996 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
THBS1P07996 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS1P07996 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
THBS1P07996 MIR26A1-201ENST00000362205 77 ntBASIC2.62□□□□□ -1.99
THBS1P07996 SNORA38-201ENST00000363946 132 ntBASIC2.62□□□□□ -1.99
THBS1P07996 RNU1-148P-201ENST00000384472 162 ntBASIC2.62□□□□□ -1.99
THBS1P07996 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
THBS1P07996 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
THBS1P07996 MIR3935-201ENST00000583472 104 ntBASIC2.62□□□□□ -1.99
THBS1P07996 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
THBS1P07996 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
THBS1P07996 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
THBS1P07996 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
THBS1P07996 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
THBS1P07996 RNU6-112P-201ENST00000363599 104 ntBASIC2.61□□□□□ -1.99
THBS1P07996 SNORA25.9-201ENST00000365087 128 ntBASIC2.61□□□□□ -1.99
THBS1P07996 MIR1283-2-201ENST00000408621 87 ntBASIC2.61□□□□□ -1.99
THBS1P07996 AC022018.1-201ENST00000430685 241 ntBASIC2.61□□□□□ -1.99
THBS1P07996 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
THBS1P07996 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
THBS1P07996 AC090255.1-201ENST00000495779 349 ntBASIC2.61□□□□□ -1.99
THBS1P07996 RNVU1-2-201ENST00000516326 135 ntBASIC2.61□□□□□ -1.99
THBS1P07996 AC141846.1-201ENST00000568348 142 ntBASIC2.61□□□□□ -1.99
THBS1P07996 AC020891.4-201ENST00000605745 93 ntBASIC2.61□□□□□ -1.99
THBS1P07996 AL137790.1-201ENST00000634283 177 ntBASIC2.61□□□□□ -1.99
THBS1P07996 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
THBS1P07996 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
THBS1P07996 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
THBS1P07996 Y_RNA.57-201ENST00000362806 113 ntBASIC2.6□□□□□ -1.99
THBS1P07996 RNU4-32P-201ENST00000363404 141 ntBASIC2.6□□□□□ -1.99
THBS1P07996 RNU1-51P-201ENST00000365345 176 ntBASIC2.6□□□□□ -1.99
THBS1P07996 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
THBS1P07996 RNU6-871P-201ENST00000516122 100 ntBASIC2.6□□□□□ -1.99
THBS1P07996 U1.36-201ENST00000620684 176 ntBASIC2.6□□□□□ -1.99
THBS1P07996 MIR4251-201ENST00000635819 61 ntBASIC2.6□□□□□ -1.99
THBS1P07996 AL365361.1-201ENST00000566942 3481 ntBASIC2.6□□□□□ -1.99
THBS1P07996 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
THBS1P07996 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
THBS1P07996 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
THBS1P07996 RNU6-1123P-201ENST00000362347 106 ntBASIC2.59□□□□□ -1.99
THBS1P07996 RNU6-296P-201ENST00000384608 107 ntBASIC2.59□□□□□ -1.99
THBS1P07996 RNU6-1237P-201ENST00000384777 107 ntBASIC2.59□□□□□ -1.99
THBS1P07996 MIR518A2-201ENST00000384966 87 ntBASIC2.59□□□□□ -1.99
THBS1P07996 AC011753.1-201ENST00000451001 220 ntBASIC2.59□□□□□ -1.99
THBS1P07996 Y_RNA.648-201ENST00000459455 110 ntBASIC2.59□□□□□ -1.99
THBS1P07996 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
THBS1P07996 RNU6-322P-201ENST00000516010 103 ntBASIC2.59□□□□□ -1.99
THBS1P07996 RNU7-153P-201ENST00000516455 62 ntBASIC2.59□□□□□ -1.99
THBS1P07996 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
THBS1P07996 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.59□□□□□ -2
THBS1P07996 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.58□□□□□ -2
THBS1P07996 RNU6-478P-201ENST00000363904 110 ntBASIC2.58□□□□□ -2
THBS1P07996 RNU6-686P-201ENST00000364839 107 ntBASIC2.58□□□□□ -2
THBS1P07996 RNU6-571P-201ENST00000384128 107 ntBASIC2.58□□□□□ -2
THBS1P07996 AC027119.1-201ENST00000440877 241 ntBASIC2.58□□□□□ -2
THBS1P07996 SNRPGP12-201ENST00000449481 213 ntBASIC2.58□□□□□ -2
THBS1P07996 FGF7P7-201ENST00000514120 227 ntBASIC2.58□□□□□ -2
THBS1P07996 AL662814.1-201ENST00000617364 121 ntBASIC2.58□□□□□ -2
THBS1P07996 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
THBS1P07996 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.57□□□□□ -2
THBS1P07996 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.57□□□□□ -2
THBS1P07996 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
THBS1P07996 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
THBS1P07996 RNU6-949P-201ENST00000384040 107 ntBASIC2.57□□□□□ -2
THBS1P07996 EEF1A1P41-201ENST00000414667 207 ntBASIC2.57□□□□□ -2
THBS1P07996 RNU6-539P-201ENST00000516665 103 ntBASIC2.57□□□□□ -2
THBS1P07996 AL357312.1-201ENST00000603879 298 ntBASIC2.57□□□□□ -2
THBS1P07996 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.57□□□□□ -2
THBS1P07996 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.56□□□□□ -2
THBS1P07996 WWP1P1-201ENST00000466609 2769 ntBASIC2.56□□□□□ -2
THBS1P07996 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.56□□□□□ -2
THBS1P07996 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.56□□□□□ -2
THBS1P07996 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
THBS1P07996 RNU6-411P-201ENST00000384451 107 ntBASIC2.56□□□□□ -2
THBS1P07996 AL450471.1-201ENST00000447509 127 ntBASIC2.56□□□□□ -2
THBS1P07996 RN7SL429P-201ENST00000479090 223 ntBASIC2.56□□□□□ -2
THBS1P07996 RN7SL489P-201ENST00000486185 223 ntBASIC2.56□□□□□ -2
THBS1P07996 RN7SL327P-201ENST00000488659 223 ntBASIC2.56□□□□□ -2
THBS1P07996 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
THBS1P07996 MIR548AO-201ENST00000579992 96 ntBASIC2.56□□□□□ -2
THBS1P07996 RN7SL853P-201ENST00000617250 223 ntBASIC2.56□□□□□ -2
THBS1P07996 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
THBS1P07996 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
THBS1P07996 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms