Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 AC008079.2-201ENST00000623543 20396 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU1-106P-201ENST00000384382 164 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 SNORA75.2-201ENST00000391138 150 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 SNORA75.3-201ENST00000391231 150 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 SCARNA22-201ENST00000503991 125 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 SNORA77B-201ENST00000578179 125 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 AC091178.1-203ENST00000584586 279 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 AC019176.2-201ENST00000611579 315 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 Z95331.1-201ENST00000623075 23112 ntBASIC2.26□□□□□ -2.05
KRTAP3-3Q9BYR6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP28-201ENST00000363841 119 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP22-201ENST00000365393 109 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-716P-201ENST00000365621 103 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-439P-201ENST00000384188 106 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 CHEK2P5-201ENST00000423877 246 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 RPS26P28-201ENST00000470806 348 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ATP5LP3-201ENST00000514223 304 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 SCARNA21.2-201ENST00000516600 166 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 AC091042.1-201ENST00000579213 173 ntBASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-3Q9BYR6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR1-1-201ENST00000362147 71 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR323A-201ENST00000362199 86 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-1047P-201ENST00000364418 107 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR621-201ENST00000384919 96 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR223-201ENST00000385204 110 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 SNORA17.3-201ENST00000391159 129 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-530P-201ENST00000391180 107 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-1262P-201ENST00000516217 96 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR548AE1-201ENST00000583292 70 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RMST_2.1-201ENST00000617263 136 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR6861-201ENST00000618657 64 ntBASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP3-3Q9BYR6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP317-201ENST00000410176 116 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-1267P-201ENST00000410747 107 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP311-201ENST00000411290 116 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RPS29P7-201ENST00000439662 171 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 SCARNA10-201ENST00000459255 330 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RN7SL30P-201ENST00000488416 306 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP315-201ENST00000516340 116 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 RNA5SP312-201ENST00000517068 116 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 AC008033.2-201ENST00000542626 177 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR3691-201ENST00000578066 90 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR1269B-201ENST00000580405 75 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR3176-201ENST00000582210 90 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 AL391358.1-201ENST00000605342 190 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR6507-201ENST00000613630 70 ntBASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
KRTAP3-3Q9BYR6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
KRTAP3-3Q9BYR6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms