Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.537-201ENST00000384626 109 ntBASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 RNU4-37P-201ENST00000410214 84 ntBASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SNIP1Q8TAD8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 HSBP1P2-201ENST00000299671 229 ntBASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 RNU6-1019P-201ENST00000364424 107 ntBASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 RNA5SP356-201ENST00000515972 94 ntBASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.681-201ENST00000516445 113 ntBASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 AL512598.1-201ENST00000610158 273 ntBASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNIP1Q8TAD8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 RNA5SP42-201ENST00000364278 115 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 SNORA25.9-201ENST00000365087 128 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 RNU6-220P-201ENST00000390919 107 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 AC003685.2-201ENST00000422795 395 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.660-201ENST00000516002 120 ntBASIC3.09□□□□□ -1.91
SNIP1Q8TAD8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SNIP1Q8TAD8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 RNU6-1067P-201ENST00000384752 107 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 RNU6-1237P-201ENST00000384777 107 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 MIR635-201ENST00000384830 98 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 MTND4LP19-201ENST00000403051 166 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 RPL23AP6-201ENST00000446637 472 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 FGF7P7-201ENST00000514120 227 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 Z97988.1-201ENST00000637697 135 ntBASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNIP1Q8TAD8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 RNU4-83P-201ENST00000410863 133 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 RPS29P11-201ENST00000496507 171 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 RNU6-807P-201ENST00000516805 107 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 AC069114.2-201ENST00000604699 304 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 MIR664A-201ENST00000626086 82 ntBASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNIP1Q8TAD8 RNU6-283P-201ENST00000364788 107 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 RNY1P13-201ENST00000365030 105 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 SNORA7.4-201ENST00000384249 137 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 MIR526A1-201ENST00000384897 85 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 SNORD30.1-201ENST00000391309 70 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 RN7SL442P-201ENST00000473804 320 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 AC026333.2-201ENST00000542164 106 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 SNORD14A-201ENST00000606526 91 ntBASIC3.06□□□□□ -1.92
SNIP1Q8TAD8 RNU6-800P-201ENST00000384473 103 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 RNU6-540P-201ENST00000384622 101 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 RN7SKP132-201ENST00000516001 208 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 MAPK10-362ENST00000641864 4484 ntBASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNIP1Q8TAD8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 RNU5F-1-201ENST00000362507 117 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 RNU6-1031P-201ENST00000384773 107 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 RNA5SP292-201ENST00000390974 118 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 RNU6-587P-201ENST00000391282 106 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 Y_RNA.648-201ENST00000459455 110 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 GTF3AP2-201ENST00000557014 266 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 AC133485.1-201ENST00000567176 124 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 AC005786.1-201ENST00000588553 154 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 AP000753.3-201ENST00000604083 169 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 MIR1297-201ENST00000637311 77 ntBASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNIP1Q8TAD8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 SNORD115-3-201ENST00000363100 82 ntBASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 RNU6-811P-201ENST00000384069 107 ntBASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 RNU6-950P-201ENST00000384651 107 ntBASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 MIR5094-201ENST00000578766 85 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 342.8 ms