Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 MIR449A-201ENST00000362113 91 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 RNA5SP133-201ENST00000363368 119 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 RNU6-624P-201ENST00000363411 107 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 SNORA2B-201ENST00000384583 137 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 MIR526A1-201ENST00000384897 85 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 MIR1236-201ENST00000408340 102 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 RNU6-602P-201ENST00000411155 105 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 AC006989.1-201ENST00000427212 131 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 AC087499.7-201ENST00000441958 109 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 AC093850.1-201ENST00000454121 251 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 AC004223.1-201ENST00000479840 271 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 MIR5094-201ENST00000578766 85 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
SHISA2Q6UWI4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SHISA2Q6UWI4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.57□□□□□ -2
SHISA2Q6UWI4 RNU6-478P-201ENST00000363904 110 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 RNA5SP344-201ENST00000411081 104 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 SNORA25.13-201ENST00000516395 103 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 AC026333.2-201ENST00000542164 106 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 MIR3162-201ENST00000581818 82 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 MIR3945-201ENST00000581853 98 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.56□□□□□ -2
SHISA2Q6UWI4 AL513423.1-201ENST00000621695 132 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
SHISA2Q6UWI4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA2Q6UWI4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA2Q6UWI4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA2Q6UWI4 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
SHISA2Q6UWI4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SHISA2Q6UWI4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHISA2Q6UWI4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHISA2Q6UWI4 HSBP1P2-201ENST00000299671 229 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 MIR148B-201ENST00000362252 99 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 RNU6-1094P-201ENST00000362416 104 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 RNU6-283P-201ENST00000364788 107 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 RNA5SP138-201ENST00000365098 114 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 RNU6-519P-201ENST00000410590 108 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.55□□□□□ -2
SHISA2Q6UWI4 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 SNORD14A-201ENST00000606526 91 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 AP001362.1-201ENST00000625165 124 ntBASIC2.55□□□□□ -2
SHISA2Q6UWI4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHISA2Q6UWI4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.54□□□□□ -2
SHISA2Q6UWI4 Y_RNA.168-201ENST00000363740 102 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
SHISA2Q6UWI4 RNU7-153P-201ENST00000516455 62 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 MTND5P40-201ENST00000559945 246 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
SHISA2Q6UWI4 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 AC105081.1-201ENST00000617727 106 ntBASIC2.54□□□□□ -2
SHISA2Q6UWI4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.54□□□□□ -2
SHISA2Q6UWI4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHISA2Q6UWI4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
SHISA2Q6UWI4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SHISA2Q6UWI4 AL021368.2-201ENST00000606125 5352 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 Y_RNA.57-201ENST00000362806 113 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 MIR660-201ENST00000385235 97 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 Z98742.3-201ENST00000418637 326 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 BX510359.4-201ENST00000423750 193 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 RPL23AP6-201ENST00000446637 472 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
SHISA2Q6UWI4 RNU6-557P-201ENST00000516842 110 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.53□□□□□ -2
SHISA2Q6UWI4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHISA2Q6UWI4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 RNA5SP432-201ENST00000362480 116 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 SNORD115-3-201ENST00000363100 82 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 SNORA71.1-201ENST00000364523 117 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 SNORD4B-201ENST00000459083 72 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 RNA5SP356-201ENST00000515972 94 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 SNORA74.3-201ENST00000517108 154 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 AC021506.2-201ENST00000612354 169 ntBASIC2.52□□□□□ -2.01
SHISA2Q6UWI4 RNA5SP42-201ENST00000364278 115 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 SNORA40.18-201ENST00000391200 128 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 AC008885.1-201ENST00000514930 301 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 RNU6-917P-201ENST00000516294 104 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 RNU6-539P-201ENST00000516665 103 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 MIR622-201ENST00000638396 96 ntBASIC2.51□□□□□ -2.01
SHISA2Q6UWI4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 RNY1P13-201ENST00000365030 105 ntBASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 SNORA7.4-201ENST00000384249 137 ntBASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 AL450471.1-201ENST00000447509 127 ntBASIC2.5□□□□□ -2.01
SHISA2Q6UWI4 AC099513.1-201ENST00000490423 301 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms