Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
LHX6Q9UPM6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX6Q9UPM6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LHX6Q9UPM6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LHX6Q9UPM6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 WWP1P1-201ENST00000466609 2769 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 MIR942-201ENST00000401111 86 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 AL138878.1-201ENST00000405131 347 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 RNA5SP341-201ENST00000516261 117 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 SNORA74.3-201ENST00000517108 154 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.5□□□□□ -1.85
LHX6Q9UPM6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LHX6Q9UPM6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 RNU1-109P-201ENST00000383960 147 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 RNU6-630P-201ENST00000391258 106 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 SNORD59.2-201ENST00000516873 68 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 SNORD92-201ENST00000585078 85 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.49□□□□□ -1.85
LHX6Q9UPM6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
LHX6Q9UPM6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LHX6Q9UPM6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LHX6Q9UPM6 MAPK10-322ENST00000641485 4530 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SNORD36A-201ENST00000362874 73 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SNORA25.4-201ENST00000363666 124 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 RNU6-949P-201ENST00000384040 107 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SNORD38B-201ENST00000384690 67 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 MIR199A2-201ENST00000385289 110 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 RNU6-220P-201ENST00000390919 107 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SNORA48.8-201ENST00000391324 134 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 AC027119.1-201ENST00000440877 241 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.48□□□□□ -1.85
LHX6Q9UPM6 MIR7851-201ENST00000610611 160 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 AL591424.2-201ENST00000617023 128 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SNORD38B-202ENST00000625943 69 ntBASIC3.48□□□□□ -1.85
LHX6Q9UPM6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LHX6Q9UPM6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 Y_RNA.283-201ENST00000364798 112 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 RNU6-614P-201ENST00000384369 107 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 RNU7-43P-201ENST00000516554 64 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 AC138749.4-201ENST00000563970 127 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 U6.59-201ENST00000615686 107 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 AL662814.1-201ENST00000617364 121 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 AC022149.2-201ENST00000621061 203 ntBASIC3.47□□□□□ -1.85
LHX6Q9UPM6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX6Q9UPM6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
LHX6Q9UPM6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
LHX6Q9UPM6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
LHX6Q9UPM6 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
LHX6Q9UPM6 MIR486-1-201ENST00000612171 68 ntBASIC3.46□□□□□ -1.86
LHX6Q9UPM6 AL513423.1-201ENST00000621695 132 ntBASIC3.46□□□□□ -1.86
LHX6Q9UPM6 AC008133.2-201ENST00000624540 351 ntBASIC3.46□□□□□ -1.86
LHX6Q9UPM6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 RNU6-1254P-201ENST00000391266 104 ntBASIC3.45□□□□□ -1.86
LHX6Q9UPM6 HMGN2P7-201ENST00000456186 273 ntBASIC3.45□□□□□ -1.86
LHX6Q9UPM6 SCARNA16.3-201ENST00000516595 184 ntBASIC3.45□□□□□ -1.86
LHX6Q9UPM6 MIR5680-201ENST00000577577 84 ntBASIC3.45□□□□□ -1.86
LHX6Q9UPM6 MIR5094-201ENST00000578766 85 ntBASIC3.45□□□□□ -1.86
LHX6Q9UPM6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LHX6Q9UPM6 RNU4-82P-201ENST00000362443 140 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 RNU6-283P-201ENST00000364788 107 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 SNORD6-201ENST00000365444 73 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 MIR660-201ENST00000385235 97 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 RNU6-243P-201ENST00000391140 107 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 AL023284.1-201ENST00000403956 276 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 AL159169.1-201ENST00000421119 127 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 BX276092.1-201ENST00000427368 251 ntBASIC3.44□□□□□ -1.86
LHX6Q9UPM6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LHX6Q9UPM6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LHX6Q9UPM6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
LHX6Q9UPM6 IPO8P1-201ENST00000455509 3109 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 RNU1-58P-201ENST00000362413 163 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 RNU6-330P-201ENST00000363015 107 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 Y_RNA.443-201ENST00000384135 111 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 HMGN2P39-201ENST00000398005 273 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 AC012531.5-201ENST00000611375 151 ntBASIC3.43□□□□□ -1.86
LHX6Q9UPM6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LHX6Q9UPM6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX6Q9UPM6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX6Q9UPM6 RNU4-35P-201ENST00000362588 141 ntBASIC3.42□□□□□ -1.86
LHX6Q9UPM6 RNU6-895P-201ENST00000384125 103 ntBASIC3.42□□□□□ -1.86
LHX6Q9UPM6 RNU6-154P-201ENST00000384306 106 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms