Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LAPTM4BQ86VI4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 RNU1-58P-201ENST00000362413 163 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 Y_RNA.264-201ENST00000364665 102 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 RNVU1-14-201ENST00000384770 164 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 MIR34B-201ENST00000385076 84 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 AC015818.7-201ENST00000428754 109 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 RNU7-170P-201ENST00000459303 61 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 AC007179.3-201ENST00000604976 235 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 AP003355.3-201ENST00000623465 114 ntBASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LAPTM4BQ86VI4 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 SNORD6-201ENST00000365444 73 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-1241P-201ENST00000384536 107 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-663P-201ENST00000391105 106 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 BX276092.1-201ENST00000427368 251 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 AC005908.1-201ENST00000468701 347 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-303P-201ENST00000517091 106 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 SNORA74.3-201ENST00000517108 154 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 AC026271.5-201ENST00000577873 130 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 AC008133.2-201ENST00000624540 351 ntBASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LAPTM4BQ86VI4 RNU6-471P-201ENST00000383944 106 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 SNORD21-201ENST00000383953 95 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 SNORD38B-201ENST00000384690 67 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 SCARNA16.3-201ENST00000516595 184 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 AC104996.3-201ENST00000590718 94 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 AC067747.1-201ENST00000608026 250 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 SNORD38B-202ENST00000625943 69 ntBASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LAPTM4BQ86VI4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AL161431.1-201ENST00000618966 4205 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AC131280.1-202ENST00000624067 4211 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 RNA5SP72-201ENST00000364442 117 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 RNU6-132P-201ENST00000383863 107 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 MIR520H-201ENST00000385126 88 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 MIR660-201ENST00000385235 97 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AC019129.1-201ENST00000403786 261 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 RNU2-7P-201ENST00000410794 178 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 BX510359.4-201ENST00000423750 193 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AC093423.1-201ENST00000440817 142 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 MIR548AO-201ENST00000579992 96 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 AC021506.2-201ENST00000612354 169 ntBASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
LAPTM4BQ86VI4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 RNU1-33P-201ENST00000364249 162 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 SNORD115-31-201ENST00000365318 82 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 Y_RNA.491-201ENST00000384417 107 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 AL023284.1-201ENST00000403956 276 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 RNU2-27P-201ENST00000516185 142 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 MIR3064-201ENST00000581130 66 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 AC022202.1-201ENST00000613515 211 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LAPTM4BQ86VI4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 MIR30E-201ENST00000362104 92 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 Y_RNA.12-201ENST00000362393 112 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 RNU1-70P-201ENST00000362618 164 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 SNORA8.1-201ENST00000384250 140 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 MIR9-2-201ENST00000384838 87 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 AC138749.4-201ENST00000563970 127 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 AL662814.1-201ENST00000617364 121 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 AL513423.1-201ENST00000621695 132 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 U6.109-201ENST00000636749 87 ntBASIC3.25□□□□□ -1.89
LAPTM4BQ86VI4 RNU6-571P-201ENST00000384128 107 ntBASIC3.24□□□□□ -1.89
LAPTM4BQ86VI4 MIR597-201ENST00000384968 97 ntBASIC3.24□□□□□ -1.89
LAPTM4BQ86VI4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms