Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR5588-201ENST00000581890 63 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HLA-CQ95604 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-CQ95604 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-CQ95604 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-CQ95604 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-CQ95604 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-CQ95604 Y_RNA.370-201ENST00000365589 108 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 RNU6-616P-201ENST00000384353 107 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-CQ95604 RPS29P29-201ENST00000456396 171 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-CQ95604 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-CQ95604 AC026333.2-201ENST00000542164 106 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-CQ95604 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 UBL5P2-201ENST00000583788 219 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 SNORD3E-202ENST00000627253 216 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.87
HLA-CQ95604 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-CQ95604 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-CQ95604 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-CQ95604 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-CQ95604 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-CQ95604 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-CQ95604 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-CQ95604 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-CQ95604 RNU6-497P-201ENST00000365316 104 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 SNORA7.4-201ENST00000384249 137 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 RNA5SP184-201ENST00000411071 108 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 RNU7-73P-201ENST00000458743 63 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 RNU6-521P-201ENST00000516663 105 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 MIR4319-201ENST00000577285 85 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 MIR548AE2-201ENST00000583456 67 ntBASIC3.39□□□□□ -1.87
HLA-CQ95604 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-CQ95604 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-CQ95604 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-CQ95604 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HLA-CQ95604 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 RNU6-1296P-201ENST00000383879 107 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 MIR136-201ENST00000385207 82 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-CQ95604 RNU6-1258P-201ENST00000516911 111 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 MIR548Z-201ENST00000584743 97 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 AC091304.10-201ENST00000641554 121 ntBASIC3.38□□□□□ -1.87
HLA-CQ95604 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-CQ95604 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-CQ95604 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-CQ95604 RNU6-219P-201ENST00000364728 107 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 SNORA26.6-201ENST00000391256 115 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 U8.16-201ENST00000391279 133 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 RNU6-402P-201ENST00000410678 103 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-CQ95604 AL512310.12-203ENST00000640543 90 ntBASIC3.37□□□□□ -1.87
HLA-CQ95604 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-CQ95604 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-CQ95604 MAPK10-266ENST00000641066 6555 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-CQ95604 AC009487.2-201ENST00000420969 6821 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-CQ95604 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-CQ95604 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-CQ95604 Y_RNA.73-201ENST00000362910 113 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 Y_RNA.426-201ENST00000384068 113 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 Y_RNA.470-201ENST00000384307 117 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 RN7SKP192-201ENST00000411291 327 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-CQ95604 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 AC108729.3-201ENST00000513484 108 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 RNA5SP168-201ENST00000516642 112 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-CQ95604 MIR6717-201ENST00000622747 73 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
HLA-CQ95604 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HLA-CQ95604 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-CQ95604 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-CQ95604 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 Y_RNA.620-201ENST00000411009 88 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 AC105272.1-201ENST00000438604 198 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 RNU7-67P-201ENST00000459003 62 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 RNU7-12P-201ENST00000516030 62 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 MIR7843-201ENST00000622274 79 ntBASIC3.35□□□□□ -1.87
HLA-CQ95604 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-CQ95604 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-CQ95604 Y_RNA.190-201ENST00000363964 101 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 Y_RNA.244-201ENST00000364484 109 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 AL139132.1-201ENST00000431587 344 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 RNU7-45P-201ENST00000459460 63 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 MIR4668-201ENST00000582284 70 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 AC103810.6-201ENST00000606708 136 ntBASIC3.34□□□□□ -1.87
HLA-CQ95604 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HLA-CQ95604 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-CQ95604 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HLA-CQ95604 ICE2P2-201ENST00000483823 2787 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms