Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 RNU6-518P-201ENST00000516056 96 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 AC008011.1-201ENST00000545989 227 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 CYCSP40-201ENST00000575927 294 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 MIR4460-201ENST00000577862 86 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 MAPK10-266ENST00000641066 6555 ntBASIC1.57□□□□□ -2.16
LCE4AQ5TA78 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LCE4AQ5TA78 MAPK10-320ENST00000641462 6696 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 IARS-213ENST00000627121 4587 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 RNA5SP326-201ENST00000363209 110 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 Y_RNA.345-201ENST00000365384 92 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 RPS29P17-201ENST00000430795 166 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AC011998.1-201ENST00000433403 117 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 RN7SL441P-201ENST00000492388 296 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 RN7SL810P-201ENST00000493031 276 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 SNORA74D-201ENST00000516404 141 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 CYP3A54P-201ENST00000566950 75 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 FAM27B-201ENST00000610601 213 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AL138721.1-201ENST00000616756 179 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AC067863.3-201ENST00000624172 122 ntBASIC1.56□□□□□ -2.16
LCE4AQ5TA78 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LCE4AQ5TA78 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP264-201ENST00000363115 107 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 U8.2-201ENST00000363156 134 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP366-201ENST00000365454 123 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR491-201ENST00000384877 84 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR29B1-201ENST00000385015 81 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR125B1-201ENST00000385236 88 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 SNORA48.4-201ENST00000391089 134 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP317-201ENST00000410176 116 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP95-201ENST00000410319 137 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP311-201ENST00000411290 116 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNU7-104P-201ENST00000459398 79 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNU1-6P-201ENST00000516290 144 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP315-201ENST00000516340 116 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNA5SP312-201ENST00000517068 116 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR4513-201ENST00000581077 86 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR3124-201ENST00000582636 67 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 AC244107.2-201ENST00000611773 76 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 MIR3653-201ENST00000625572 110 ntBASIC1.55□□□□□ -2.16
LCE4AQ5TA78 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE4AQ5TA78 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms