Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-681P-201ENST00000364012 104 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 MIR1289-1-201ENST00000408836 144 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 RNU2-48P-201ENST00000410694 191 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 AC005908.1-201ENST00000468701 347 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 AP000753.3-201ENST00000604083 169 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 MIR7851-201ENST00000610611 160 ntBASIC3.82□□□□□ -1.8
VARS2Q5ST30 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARS2Q5ST30 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VARS2Q5ST30 AC245060.5-201ENST00000610778 3293 ntBASIC3.81□□□□□ -1.8
VARS2Q5ST30 Y_RNA.510-201ENST00000384511 114 ntBASIC3.81□□□□□ -1.8
VARS2Q5ST30 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
VARS2Q5ST30 SNRPGP12-201ENST00000449481 213 ntBASIC3.81□□□□□ -1.8
VARS2Q5ST30 AC023790.1-201ENST00000482174 347 ntBASIC3.81□□□□□ -1.8
VARS2Q5ST30 MIR4536-1-201ENST00000583537 88 ntBASIC3.81□□□□□ -1.8
VARS2Q5ST30 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VARS2Q5ST30 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VARS2Q5ST30 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
VARS2Q5ST30 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VARS2Q5ST30 AL365361.1-201ENST00000566942 3481 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VARS2Q5ST30 RNU6-829P-201ENST00000363700 112 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 RNU6-132P-201ENST00000383863 107 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 RNU6-895P-201ENST00000384125 103 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 HSPE1P24-201ENST00000450782 238 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 HMGN2P16-201ENST00000456802 261 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 MIR8055-201ENST00000610739 97 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 U4.6-201ENST00000621618 127 ntBASIC3.8□□□□□ -1.8
VARS2Q5ST30 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
VARS2Q5ST30 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VARS2Q5ST30 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
VARS2Q5ST30 RNU1-23P-201ENST00000363361 144 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 RNU6-833P-201ENST00000363486 107 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 SNORA38-201ENST00000363946 132 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 RNU6-283P-201ENST00000364788 107 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 RNU6-154P-201ENST00000384306 106 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 Y_RNA.491-201ENST00000384417 107 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 SNORA72.6-201ENST00000384520 129 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.79□□□□□ -1.8
VARS2Q5ST30 AC025518.1-201ENST00000479856 347 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 SNORA28-201ENST00000606769 126 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.79□□□□□ -1.8
VARS2Q5ST30 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VARS2Q5ST30 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
VARS2Q5ST30 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.78□□□□□ -1.8
VARS2Q5ST30 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 RNU4-35P-201ENST00000362588 141 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 Y_RNA.354-201ENST00000365448 111 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 RNA5SP167-201ENST00000365461 116 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 MIR767-201ENST00000390228 109 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
VARS2Q5ST30 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
VARS2Q5ST30 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
VARS2Q5ST30 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VARS2Q5ST30 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNU1-33P-201ENST00000364249 162 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNA5SP252-201ENST00000391131 119 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 HSPE1P26-201ENST00000405341 275 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNA5SP38-201ENST00000410750 119 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 AC005326.1-201ENST00000429197 123 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RN7SL429P-201ENST00000479090 223 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RN7SL489P-201ENST00000486185 223 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RN7SL327P-201ENST00000488659 223 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNU6-75P-201ENST00000515944 104 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RN7SL853P-201ENST00000617250 223 ntBASIC3.77□□□□□ -1.81
VARS2Q5ST30 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VARS2Q5ST30 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VARS2Q5ST30 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VARS2Q5ST30 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 MIR95-201ENST00000385072 81 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 MIR516B2-201ENST00000385190 85 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 SNORD17-201ENST00000390930 237 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 RNA5SP109-201ENST00000391010 116 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 SCARNA17.1-201ENST00000516211 143 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 SCARNA17.2-201ENST00000516334 143 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 RNU6-579P-201ENST00000516879 102 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 MIR5047-201ENST00000579212 100 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 SNORD14A-201ENST00000606526 91 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 SCARNA17.4-201ENST00000614296 143 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 MIR8054-201ENST00000620877 86 ntBASIC3.76□□□□□ -1.81
VARS2Q5ST30 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.76□□□□□ -1.81
VARS2Q5ST30 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.76□□□□□ -1.81
VARS2Q5ST30 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VARS2Q5ST30 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VARS2Q5ST30 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VARS2Q5ST30 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VARS2Q5ST30 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.75□□□□□ -1.81
VARS2Q5ST30 SNORD114-6-201ENST00000364393 72 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms