Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNA5SP236-201ENST00000516169 116 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 RNU6-1061P-201ENST00000516530 99 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 RNA5SP137-201ENST00000516833 135 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 AC022217.4-201ENST00000604389 163 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 SNORA28-201ENST00000606769 126 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
USPL1Q5W0Q7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 Y_RNA.346-201ENST00000365385 112 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 Y_RNA.525-201ENST00000384570 113 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 MIR548A2-201ENST00000384956 97 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 SNORA40.5-201ENST00000391061 128 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 HMGN2P32-201ENST00000444648 269 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 MIR3126-201ENST00000577443 74 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 AC069114.2-201ENST00000604699 304 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 AC134878.1-201ENST00000619901 243 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 MIR6873-201ENST00000622788 63 ntBASIC2.98□□□□□ -1.93
USPL1Q5W0Q7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 MIR518F-201ENST00000384973 87 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 AL021397.1-201ENST00000451806 248 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 AL670379.3-201ENST00000605040 251 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 MTND5P32-201ENST00000560711 1802 ntBASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USPL1Q5W0Q7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 SNORD77.3-201ENST00000391113 65 ntBASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 RN7SKP19-201ENST00000516016 252 ntBASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 Y_RNA.709-201ENST00000516952 92 ntBASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 MIR5197-201ENST00000583721 112 ntBASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.96□□□□□ -1.94
USPL1Q5W0Q7 AC245060.5-201ENST00000610778 3293 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU1-148P-201ENST00000384472 162 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU6-429P-201ENST00000384582 108 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU6-950P-201ENST00000384651 107 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIRLET7F2-201ENST00000385277 83 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 Y_RNA.651-201ENST00000459380 103 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU5E-3P-201ENST00000515913 68 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU6-548P-201ENST00000517083 115 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MTND5P34-201ENST00000568888 325 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIR3670-2-201ENST00000582974 65 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIR3670-1-201ENST00000584160 65 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIR3670-3-201ENST00000584855 65 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIR3670-4-201ENST00000612260 65 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 AC022513.1-201ENST00000624512 117 ntBASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USPL1Q5W0Q7 RNU6-153P-201ENST00000364422 104 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 SNORA64-201ENST00000384674 134 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 RNY4P18-201ENST00000391107 89 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 MIR548O-201ENST00000408583 114 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 RNU6-589P-201ENST00000516485 107 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 SNORD45.4-201ENST00000516629 73 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 MIR6129-201ENST00000616087 109 ntBASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USPL1Q5W0Q7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 MIR6073-201ENST00000352083 89 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 SNRPGP14-201ENST00000435400 219 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 RNU6-1149P-201ENST00000516810 97 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 SCARNA15-202ENST00000516881 127 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 AC004486.1-201ENST00000546846 233 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 MIR8054-201ENST00000620877 86 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 AC010297.1-201ENST00000623948 149 ntBASIC2.93□□□□□ -1.94
USPL1Q5W0Q7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 SNORD115-3-201ENST00000363100 82 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 RNU6-268P-201ENST00000364174 107 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 RNU6-755P-201ENST00000364400 103 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 MIR548A3-201ENST00000385297 97 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 RNU6-440P-201ENST00000390882 105 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 MIR5007-201ENST00000583098 95 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 AC025166.1-201ENST00000612411 163 ntBASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.92□□□□□ -1.94
USPL1Q5W0Q7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 SNORD115-28-201ENST00000363931 81 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 SNORA67.3-201ENST00000384366 140 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 SNORA80E-201ENST00000384744 137 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 RNA5SP465-201ENST00000391195 109 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 AL606517.2-201ENST00000442855 241 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 HMGN2P23-201ENST00000456759 269 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 PDCD5P2-201ENST00000507570 312 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 SNORD33.1-201ENST00000516213 88 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms