Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 SNORA62.3-201ENST00000365110 153 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 SNORA9-201ENST00000384215 133 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 SNORA70C-201ENST00000384538 135 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR634-201ENST00000385208 97 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR548L-201ENST00000408303 86 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNU7-26P-201ENST00000458980 63 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SL352P-201ENST00000466002 277 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SL330P-201ENST00000469709 307 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 AC109327.1-201ENST00000471666 403 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 SCARNA16.4-201ENST00000516956 187 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR2116-201ENST00000517221 80 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR4432-201ENST00000581823 84 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SL690P-201ENST00000582087 240 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR3939-201ENST00000582614 106 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 AC006272.2-201ENST00000594725 163 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNVU1-4-201ENST00000612985 164 ntBASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-11Q9BYQ6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MAPK10-320ENST00000641462 6696 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNU1-94P-201ENST00000362627 173 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNA5SP447-201ENST00000363749 119 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 SNORA16A-201ENST00000384342 137 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR600-201ENST00000385007 98 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNA5SP344-201ENST00000411081 104 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 AC104333.2-201ENST00000422630 192 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNA5SP484-201ENST00000458857 111 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ACA64.4-201ENST00000459070 127 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SL594P-201ENST00000470590 287 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SKP83-201ENST00000516512 178 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RN7SKP260-201ENST00000516907 149 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RNA5SP373-201ENST00000517271 95 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 SNORA74C-1-201ENST00000580726 201 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR4311-201ENST00000580794 100 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MIR4676-201ENST00000583078 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 UCA1.1-201ENST00000620952 75 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 AC027335.2-201ENST00000624030 375 ntBASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-11Q9BYQ6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-11Q9BYQ6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-11Q9BYQ6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-11Q9BYQ6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms