Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRCH3Q96II8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRCH3Q96II8 RNU6-315P-201ENST00000362666 107 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 MIR218-1-201ENST00000384999 110 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 AC003685.2-201ENST00000422795 395 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 UBL5P3-201ENST00000475112 231 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 SNORA31.1-201ENST00000515993 133 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 SNORA31.5-201ENST00000516190 133 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 RNU7-181P-201ENST00000517234 74 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 IGLV3-17-201ENST00000519099 244 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 AC024995.1-201ENST00000523014 93 ntBASIC3.77□□□□□ -1.81
LRCH3Q96II8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.77□□□□□ -1.81
LRCH3Q96II8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
LRCH3Q96II8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRCH3Q96II8 RNU6-613P-201ENST00000410412 108 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 RNU6-1328P-201ENST00000410938 106 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 RNU7-2P-201ENST00000516096 62 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 RNU6-1116P-201ENST00000517269 99 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 MIR3152-201ENST00000579801 74 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 MIR4425-201ENST00000580572 84 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.76□□□□□ -1.81
LRCH3Q96II8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRCH3Q96II8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LRCH3Q96II8 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
LRCH3Q96II8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.75□□□□□ -1.81
LRCH3Q96II8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRCH3Q96II8 MIR515-2-201ENST00000384883 83 ntBASIC3.75□□□□□ -1.81
LRCH3Q96II8 MIR515-1-201ENST00000384884 83 ntBASIC3.75□□□□□ -1.81
LRCH3Q96II8 MIR1267-201ENST00000408723 78 ntBASIC3.75□□□□□ -1.81
LRCH3Q96II8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRCH3Q96II8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
LRCH3Q96II8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRCH3Q96II8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 SNORD115-37-201ENST00000363768 82 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 RNU6-1307P-201ENST00000391012 103 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 MIR887-201ENST00000401258 79 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 FO393413.1-201ENST00000402892 195 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 RN7SKP192-201ENST00000411291 327 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 SRIP3-201ENST00000413200 219 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 AL606517.2-201ENST00000442855 241 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 ATP5J2P3-201ENST00000451550 258 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 RN7SL297P-201ENST00000483161 293 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 GTF3AP2-201ENST00000557014 266 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 MIR7111-201ENST00000619751 72 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 MIR5739-201ENST00000619803 80 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 Y_RNA.788-201ENST00000622394 112 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
LRCH3Q96II8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.74□□□□□ -1.81
LRCH3Q96II8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 RNU6-163P-201ENST00000384396 106 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 MIR95-201ENST00000385072 81 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 SNORA26.6-201ENST00000391256 115 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 RNA5SP247-201ENST00000411181 105 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 RNU7-28P-201ENST00000516759 62 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 AC007536.1-201ENST00000533382 349 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 AL442644.1-201ENST00000454390 3105 ntBASIC3.73□□□□□ -1.81
LRCH3Q96II8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRCH3Q96II8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LRCH3Q96II8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LRCH3Q96II8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
LRCH3Q96II8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.72□□□□□ -1.81
LRCH3Q96II8 GABRG2-229ENST00000641017 3628 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRCH3Q96II8 RNU6-424P-201ENST00000384367 105 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 Y_RNA.567-201ENST00000384736 106 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 MIR34C-201ENST00000384831 77 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 RNU4-47P-201ENST00000410876 114 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 AC245047.3-201ENST00000429428 127 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 MICF-203ENST00000432679 129 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 RPS29P28-201ENST00000446439 141 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 MIR3199-1-201ENST00000582434 88 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 UCA1.1-201ENST00000620952 75 ntBASIC3.72□□□□□ -1.81
LRCH3Q96II8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRCH3Q96II8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRCH3Q96II8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRCH3Q96II8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRCH3Q96II8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LRCH3Q96II8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LRCH3Q96II8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
LRCH3Q96II8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRCH3Q96II8 SNORD114-6-201ENST00000364393 72 ntBASIC3.71□□□□□ -1.82
LRCH3Q96II8 RNU6-129P-201ENST00000391022 107 ntBASIC3.71□□□□□ -1.82
LRCH3Q96II8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.71□□□□□ -1.82
LRCH3Q96II8 CST2P1-201ENST00000425770 87 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms