Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF39Q9H2S5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF39Q9H2S5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF39Q9H2S5 MIR520C-201ENST00000385005 87 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 RNA5SP317-201ENST00000410176 116 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 RNA5SP311-201ENST00000411290 116 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 MICF-203ENST00000432679 129 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 AC026402.1-201ENST00000513642 170 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 RNA5SP315-201ENST00000516340 116 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 RNA5SP519-201ENST00000516480 119 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 RNA5SP312-201ENST00000517068 116 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 MIR3657-201ENST00000584818 117 ntBASIC4.7□□□□□ -1.66
RNF39Q9H2S5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF39Q9H2S5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 MIR30D-201ENST00000362283 70 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RNU6-247P-201ENST00000362636 107 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RNA5SP175-201ENST00000364275 119 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 U8.13-201ENST00000390842 128 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RN7SL817P-201ENST00000480777 288 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 SCARNA11.3-201ENST00000517276 130 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 MIR3199-1-201ENST00000582434 88 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RN7SL435P-201ENST00000584418 282 ntBASIC4.69□□□□□ -1.66
RNF39Q9H2S5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF39Q9H2S5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 AL022322.2-201ENST00000624072 20397 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 MIR23A-201ENST00000385245 73 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 RPS26P8-201ENST00000393490 348 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 RNU6-231P-201ENST00000517122 103 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 SCARNA4.1-201ENST00000628597 123 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 MIR492-201ENST00000638676 116 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 AC026523.2-201ENST00000625039 7739 ntBASIC4.68□□□□□ -1.66
RNF39Q9H2S5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF39Q9H2S5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF39Q9H2S5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF39Q9H2S5 RNU1-14P-201ENST00000362759 152 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 RNU1-13P-201ENST00000384499 162 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 MIR7-2-201ENST00000384970 110 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 AL355297.2-201ENST00000604792 129 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 MIR8059-201ENST00000620427 81 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 AL031595.2-201ENST00000624215 19071 ntBASIC4.67□□□□□ -1.66
RNF39Q9H2S5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF39Q9H2S5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 RNU6-23P-201ENST00000363283 107 ntBASIC4.66□□□□□ -1.66
RNF39Q9H2S5 RNA5SP167-201ENST00000365461 116 ntBASIC4.66□□□□□ -1.66
RNF39Q9H2S5 SNORA37-201ENST00000384504 129 ntBASIC4.66□□□□□ -1.66
RNF39Q9H2S5 SNORA57.1-201ENST00000391227 145 ntBASIC4.66□□□□□ -1.66
RNF39Q9H2S5 MIR3169-201ENST00000578032 83 ntBASIC4.66□□□□□ -1.66
RNF39Q9H2S5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF39Q9H2S5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNF39Q9H2S5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF39Q9H2S5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 MIR372-201ENST00000362225 67 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 RNU1-94P-201ENST00000362627 173 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 RNU6-495P-201ENST00000362995 107 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 MIR548C-201ENST00000384815 97 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 Y_RNA.588-201ENST00000391254 102 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 AL359511.1-201ENST00000402970 211 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 MIR1302-7-201ENST00000408841 72 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 NAMPTP3-201ENST00000569273 224 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 MIR6867-201ENST00000610636 67 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 AL513423.1-201ENST00000621695 132 ntBASIC4.65□□□□□ -1.67
RNF39Q9H2S5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF39Q9H2S5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms