Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MEIS3Q99687 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
MEIS3Q99687 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MEIS3Q99687 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 SNORA38-201ENST00000363946 132 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 RNU6-117P-201ENST00000365415 107 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 RNU6-81P-201ENST00000365608 104 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 Y_RNA.586-201ENST00000391146 98 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 Y_RNA.587-201ENST00000391210 103 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 AC060773.1-201ENST00000421698 310 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.97□□□□□ -2.09
MEIS3Q99687 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 AC127455.1-201ENST00000565496 145 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 AL645939.4-201ENST00000604495 135 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 AC005972.2-201ENST00000604690 348 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 AL355297.2-201ENST00000604792 129 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 MIR5739-201ENST00000619803 80 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MEIS3Q99687 Z82209.1-201ENST00000422141 2135 ntBASIC1.97□□□□□ -2.09
MEIS3Q99687 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MEIS3Q99687 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MEIS3Q99687 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MEIS3Q99687 SNORA33-201ENST00000363664 130 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 Y_RNA.343-201ENST00000365354 112 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 SNORD50.2-201ENST00000365465 70 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-1235P-201ENST00000384559 107 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-768P-201ENST00000384683 107 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-460P-201ENST00000391158 108 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 AL512604.1-201ENST00000404812 257 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.96□□□□□ -2.1
MEIS3Q99687 AC074290.1-201ENST00000448883 135 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-498P-201ENST00000459468 107 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 AC093259.1-201ENST00000509755 300 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-971P-201ENST00000516920 106 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU6-667P-201ENST00000517186 102 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
MEIS3Q99687 MIR4438-201ENST00000585271 93 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 AL049861.1-201ENST00000603130 150 ntBASIC1.96□□□□□ -2.1
MEIS3Q99687 RNU1-22P-201ENST00000363334 158 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RNU4-13P-201ENST00000364019 141 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RNU4-41P-201ENST00000364426 143 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 Y_RNA.542-201ENST00000384641 111 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RNU6-417P-201ENST00000384712 107 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 HMGN2P34-201ENST00000437647 269 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RPS4XP11-201ENST00000446897 772 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 HSPE1P13-201ENST00000451143 297 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 SNRPGP8-201ENST00000454064 226 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 RNU6-437P-201ENST00000459408 95 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 AC107027.2-201ENST00000512197 115 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 MIR548X2-201ENST00000579776 100 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 MIR4658-201ENST00000584344 65 ntBASIC1.95□□□□□ -2.1
MEIS3Q99687 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 SNORD45.3-201ENST00000363836 72 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-271P-201ENST00000363858 105 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 Y_RNA.261-201ENST00000364631 102 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-643P-201ENST00000384018 107 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-1323P-201ENST00000384025 107 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-959P-201ENST00000384671 107 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 SNORD37.2-201ENST00000391075 66 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-588P-201ENST00000410281 105 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-1186P-201ENST00000410429 97 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 MTND4LP9-201ENST00000427694 174 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.94□□□□□ -2.1
MEIS3Q99687 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.94□□□□□ -2.1
MEIS3Q99687 AC005840.1-201ENST00000498412 377 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-1041P-201ENST00000516254 102 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU6-1234P-201ENST00000516877 103 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU7-172P-201ENST00000517125 64 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 RNU1-104P-201ENST00000517280 175 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 MIR3684-201ENST00000579779 74 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 DNAJC19P2-201ENST00000593340 302 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 BX248123.2-201ENST00000606318 124 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 AL391903.3-201ENST00000612158 163 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 AC022202.1-201ENST00000613515 211 ntBASIC1.94□□□□□ -2.1
MEIS3Q99687 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MEIS3Q99687 AC010332.2-201ENST00000613083 1904 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 RNU6-1082P-201ENST00000364574 107 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 SNORA67.1-201ENST00000364749 141 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 Y_RNA.332-201ENST00000365271 113 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 RNU6-144P-201ENST00000383951 107 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 SNORA22C-201ENST00000384614 134 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 MIR95-201ENST00000385072 81 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
MEIS3Q99687 RNA5SP467-201ENST00000391274 118 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 AC123900.1-201ENST00000420390 96 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 AC097462.1-201ENST00000514125 324 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 RPL23AP91-201ENST00000569211 455 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 AL353997.5-201ENST00000618886 171 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.93□□□□□ -2.1
MEIS3Q99687 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
MEIS3Q99687 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms