Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.190-201ENST00000363964 101 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-60P-201ENST00000364792 103 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.336-201ENST00000365307 109 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 Z92545.1-201ENST00000411782 234 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 MRPL35P3-201ENST00000421557 364 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AL109933.2-201ENST00000452651 260 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 RN7SKP57-201ENST00000517248 293 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 MIR4777-201ENST00000583710 86 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AC064859.1-201ENST00000624741 174 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 MIR7157-201ENST00000635801 60 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AC091304.10-201ENST00000641554 121 ntBASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.88
LYSMD3Q7Z3D4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-1296P-201ENST00000383879 107 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA80E-201ENST00000384744 137 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 AL353813.1-201ENST00000440700 253 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-267P-201ENST00000516714 103 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 MIR7515-201ENST00000637837 67 ntBASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LYSMD3Q7Z3D4 Z83843.1-201ENST00000604070 3685 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 AC008264.2-201ENST00000610193 3731 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 Y_RNA.313-201ENST00000365095 103 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA18-201ENST00000384416 132 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD116-22-201ENST00000384430 92 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 AL022718.1-201ENST00000412004 84 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 AC005326.1-201ENST00000429197 123 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 CYP2C59P-201ENST00000457790 269 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA31.4-201ENST00000516049 129 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 MIR4666B-201ENST00000578142 81 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 MIR4474-201ENST00000579189 78 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 CTSLP2-204ENST00000629029 392 ntBASIC3.32□□□□□ -1.88
LYSMD3Q7Z3D4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 AL035398.1-201ENST00000430869 322 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 AL163195.1-201ENST00000496941 348 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-857P-201ENST00000515893 110 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 SCARNA13-201ENST00000516672 275 ntBASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD3Q7Z3D4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD115-35-201ENST00000365122 82 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 Y_RNA.437-201ENST00000384113 113 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 RNU2-11P-201ENST00000459191 187 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 RNU7-171P-201ENST00000459581 62 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 TRBV12-1-201ENST00000479785 344 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD3Q7Z3D4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD115-13-201ENST00000363358 82 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD115-16-201ENST00000363887 82 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD45B-201ENST00000364617 72 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-219P-201ENST00000364728 107 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD115-1-201ENST00000364961 82 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA27-201ENST00000384323 126 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-679P-201ENST00000391003 106 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SNORA7.5-201ENST00000410672 110 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 AL356280.1-201ENST00000603614 379 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 YPEL5P2-201ENST00000605553 359 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 AC021613.1-201ENST00000623880 111 ntBASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms