Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 SNORA8.1-201ENST00000384250 140 ntBASIC4.99□□□□□ -1.61
NPM3O75607 MIR1179-201ENST00000408703 91 ntBASIC4.99□□□□□ -1.61
NPM3O75607 ABCF2P2-201ENST00000450549 296 ntBASIC4.99□□□□□ -1.61
NPM3O75607 snoU13.27-201ENST00000459278 104 ntBASIC4.99□□□□□ -1.61
NPM3O75607 MIR1254-2-201ENST00000579553 63 ntBASIC4.99□□□□□ -1.61
NPM3O75607 MIR4251-201ENST00000635819 61 ntBASIC4.99□□□□□ -1.61
NPM3O75607 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.99□□□□□ -1.61
NPM3O75607 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPM3O75607 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.99□□□□□ -1.61
NPM3O75607 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
NPM3O75607 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPM3O75607 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.98□□□□□ -1.61
NPM3O75607 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPM3O75607 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPM3O75607 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.98□□□□□ -1.61
NPM3O75607 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPM3O75607 MIR424-201ENST00000362227 98 ntBASIC4.98□□□□□ -1.61
NPM3O75607 Y_RNA.12-201ENST00000362393 112 ntBASIC4.98□□□□□ -1.61
NPM3O75607 RNA5SP51-201ENST00000364750 119 ntBASIC4.98□□□□□ -1.61
NPM3O75607 RNU6-466P-201ENST00000391224 103 ntBASIC4.98□□□□□ -1.61
NPM3O75607 BX276092.1-201ENST00000427368 251 ntBASIC4.98□□□□□ -1.61
NPM3O75607 SCARNA4.1-201ENST00000628597 123 ntBASIC4.98□□□□□ -1.61
NPM3O75607 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.98□□□□□ -1.61
NPM3O75607 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.98□□□□□ -1.61
NPM3O75607 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.98□□□□□ -1.61
NPM3O75607 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPM3O75607 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NPM3O75607 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.98□□□□□ -1.61
NPM3O75607 AL356274.2-201ENST00000624379 3752 ntBASIC4.98□□□□□ -1.61
NPM3O75607 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPM3O75607 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPM3O75607 Z82217.1-201ENST00000625157 8149 ntBASIC4.97□□□□□ -1.61
NPM3O75607 Y_RNA.283-201ENST00000364798 112 ntBASIC4.97□□□□□ -1.61
NPM3O75607 SNORA70.14-201ENST00000516205 110 ntBASIC4.97□□□□□ -1.61
NPM3O75607 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NPM3O75607 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.97□□□□□ -1.61
NPM3O75607 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPM3O75607 AC108206.1-201ENST00000570186 4159 ntBASIC4.97□□□□□ -1.61
NPM3O75607 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPM3O75607 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
NPM3O75607 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 SNORD36A-201ENST00000362874 73 ntBASIC4.96□□□□□ -1.62
NPM3O75607 AC005908.1-201ENST00000468701 347 ntBASIC4.96□□□□□ -1.62
NPM3O75607 RPS29P19-201ENST00000479709 171 ntBASIC4.96□□□□□ -1.62
NPM3O75607 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.96□□□□□ -1.62
NPM3O75607 U6.109-201ENST00000636749 87 ntBASIC4.96□□□□□ -1.62
NPM3O75607 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPM3O75607 MAPK10-253ENST00000641010 4072 ntBASIC4.95□□□□□ -1.62
NPM3O75607 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPM3O75607 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NPM3O75607 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NPM3O75607 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPM3O75607 RNU6-132P-201ENST00000383863 107 ntBASIC4.95□□□□□ -1.62
NPM3O75607 MIR597-201ENST00000384968 97 ntBASIC4.95□□□□□ -1.62
NPM3O75607 SNORA48.7-201ENST00000391302 135 ntBASIC4.95□□□□□ -1.62
NPM3O75607 AC019129.1-201ENST00000403786 261 ntBASIC4.95□□□□□ -1.62
NPM3O75607 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
NPM3O75607 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.95□□□□□ -1.62
NPM3O75607 AC011753.1-201ENST00000451001 220 ntBASIC4.95□□□□□ -1.62
NPM3O75607 snoU13.22-201ENST00000459428 104 ntBASIC4.95□□□□□ -1.62
NPM3O75607 MIR3126-201ENST00000577443 74 ntBASIC4.95□□□□□ -1.62
NPM3O75607 AL096861.1-201ENST00000610899 123 ntBASIC4.95□□□□□ -1.62
NPM3O75607 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NPM3O75607 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.95□□□□□ -1.62
NPM3O75607 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.95□□□□□ -1.62
NPM3O75607 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NPM3O75607 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPM3O75607 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.95□□□□□ -1.62
NPM3O75607 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPM3O75607 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPM3O75607 Y_RNA.119-201ENST00000363301 96 ntBASIC4.94□□□□□ -1.62
NPM3O75607 RNU6-75P-201ENST00000515944 104 ntBASIC4.94□□□□□ -1.62
NPM3O75607 RNU4ATAC9P-201ENST00000517146 126 ntBASIC4.94□□□□□ -1.62
NPM3O75607 MIR6875-201ENST00000617506 72 ntBASIC4.94□□□□□ -1.62
NPM3O75607 U6.98-201ENST00000637157 84 ntBASIC4.94□□□□□ -1.62
NPM3O75607 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPM3O75607 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPM3O75607 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NPM3O75607 MIR1289-1-201ENST00000408836 144 ntBASIC4.93□□□□□ -1.62
NPM3O75607 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPM3O75607 AC099513.1-201ENST00000490423 301 ntBASIC4.93□□□□□ -1.62
NPM3O75607 RNA5SP437-201ENST00000517249 129 ntBASIC4.93□□□□□ -1.62
NPM3O75607 AC022149.2-201ENST00000621061 203 ntBASIC4.93□□□□□ -1.62
NPM3O75607 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
NPM3O75607 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPM3O75607 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPM3O75607 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.93□□□□□ -1.62
NPM3O75607 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPM3O75607 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.92□□□□□ -1.62
NPM3O75607 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NPM3O75607 SNORD96B-201ENST00000386148 79 ntBASIC4.92□□□□□ -1.62
NPM3O75607 AC006011.1-201ENST00000442758 349 ntBASIC4.92□□□□□ -1.62
NPM3O75607 RNU1-45P-201ENST00000517191 141 ntBASIC4.92□□□□□ -1.62
NPM3O75607 RNU7-156P-201ENST00000517214 74 ntBASIC4.92□□□□□ -1.62
NPM3O75607 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.92□□□□□ -1.62
NPM3O75607 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms