Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT16P6-202ENST00000425692 1426 ntBASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 LINC01023-201ENST00000606054 436 ntBASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 AC079598.2-202ENST00000546624 1451 ntBASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX49Q9Y6V7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 AC135050.7-201ENST00000624508 2218 ntBASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 KRT8P9-201ENST00000558927 1449 ntBASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX49Q9Y6V7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 AL133373.2-201ENST00000623187 2828 ntBASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX49Q9Y6V7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 AL121906.2-201ENST00000621597 723 ntBASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX49Q9Y6V7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 LTB4R2-202ENST00000528054 3092 ntBASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 MIR1224-201ENST00000408193 85 ntBASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 AL031963.3-201ENST00000606441 850 ntBASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX49Q9Y6V7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms