Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.47■□□□□ 0.55
CSNK1G3Q9Y6M4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 AL023284.2-201ENST00000405850 579 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 SPDYE15P-201ENST00000424157 909 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 AC093458.2-201ENST00000623150 629 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 KRT8P3-201ENST00000519669 1449 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G3Q9Y6M4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
CSNK1G3Q9Y6M4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CSNK1G3Q9Y6M4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 KRT18P48-201ENST00000434763 852 ntBASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 KRT126P-201ENST00000549467 1181 ntBASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G3Q9Y6M4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G3Q9Y6M4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms