Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 TFP1-202ENST00000475455 1573 ntBASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CNN2P6-201ENST00000439038 900 ntBASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 OR10C1-204ENST00000622521 1039 ntBASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB1Q9Y5G3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 AL355472.2-201ENST00000422958 438 ntBASIC17.27■□□□□ 0.36
PCDHGB1Q9Y5G3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms