Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 KRT17P2-201ENST00000300992 1314 ntBASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB3Q9Y5G1 AC007613.1-201ENST00000572811 2597 ntBASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 AC009113.1-201ENST00000570267 2443 ntBASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 AC104581.1-202ENST00000635932 2618 ntBASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 AC026471.1-201ENST00000564629 3026 ntBASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 KRT16P5-201ENST00000455284 522 ntBASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB3Q9Y5G1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 AL353807.1-201ENST00000427475 662 ntBASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 C1QL1P1-201ENST00000568105 661 ntBASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 AL049637.2-201ENST00000641778 930 ntBASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 AL031598.1-201ENST00000561511 1773 ntBASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB3Q9Y5G1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms